Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02002 | TCTCTCTCTCTTCATTTCAGTTTCAGACCCATTTTCGCCACAAACTCTGTTCTGGGTATCATGATTTTCTCCCACAAAATGCAAGAAATTGCATTCAAAATGGGCTTCACTCTCTCCGATTTCGCCCACACTTTGGAACAAGAGCGCCGTAAAGTCCTCATGTTCCAGCGCGAGCTCCCTCTCTGTTTGGAGATTGTGACTCGCGCCATTGATTGTTGCAGGCATCACGTGTCGGAGACCACGACGGAGAATCGTCTATCGGAGTGTTCGGAGCAGACTTCCAGTGACGTGGGTCTGGTTCTTGAGGAGTTTATTCCGATTAATAGATATGGGGTTTCTGATTCTGAACAACAACAACAACAACAACGACAACTGCCCTGTGAAACTCAGACGGAGAACACTGATGACTCTGATCGAAATAATTTGAATTTGTGTCCGTCGGATTGGCTCAGATCTGCCCAGCTTTGGAAGGATCCTTCTGCCTTGAATCAGGACCTGCCGGAGAAGACGGCTGTTGTTGAGGTCAAGAGTAATGGCGGAGCTTTCCGACCATTTCAGAAGGAGAAAATCGGTGGTGGAGGAACATCATCGACTTCGGCTCCGGCTGCGACGAGCTCCACTGCGGAAATGGGGTCCGGTGGAAGTAATCGACGGGAAGAAAAAGAAGCGCAGAATCAGAGGAAACAAAGACGGTGCTGGTCACCGGAGCTACACCGGCGATTCCTTCATGCTCTTCAACAGCTCGGAGGTTCCCATGTGGCGACGCCGAAGCAAATCAGAGAGTTGATGAAGGTGGATGGTCTTACCAACGACGAAGTGAAAAGTCATTTACAGAAATATCGTCTACACACGAGACGCCCAAGTACAACAATGCACCACGACGACACCGCCCAGACGCCGCAGTTCCTGGTTGTGGGCGGCATATGGGTACCGGCTGCGGAGTACGCCACCACATCCACCGGAGAAGCAGTGAGAGCAGCAACCACGAACGGAATTTACGCACCGGTGGTTAGGACGACGACCATGGCGAAGGCGAAGGCTATAGTATCTGGGGGTGCGGCGGAGTGTAATTCTGCTACTACATCGTCCTCCACACATACGTCATCAGTTTCACCTGCTTGA | 1122 | 51.25 | SLSLHFSFRPIFATNSVLGIMIFSHKMQEIAFKMGFTLSDFAHTLEQERRKVLMFQRELPLCLEIVTRAIDCCRHHVSETTTENRLSECSEQTSSDVGLVLEEFIPINRYGVSDSEQQQQQQRQLPCETQTENTDDSDRNNLNLCPSDWLRSAQLWKDPSALNQDLPEKTAVVEVKSNGGAFRPFQKEKIGGGGTSSTSAPAATSSTAEMGSGGSNRREEKEAQNQRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSTTMHHDDTAQTPQFLVVGGIWVPAAEYATTSTGEAVRAATTNGIYAPVVRTTTMAKAKAIVSGGAAECNSATTSSSTHTSSVSPA | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15542845 | 15544668 | - | Carg27343-RA | Car04g02002 | 147427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02002 | 373 | MobiDBLite | consensus disorder prediction | 214 | 232 | - | - | |
Car04g02002 | 373 | MobiDBLite | consensus disorder prediction | 113 | 143 | - | - | |
Car04g02002 | 373 | Pfam | Myb-like DNA-binding domain | 230 | 281 | IPR001005 | - | |
Car04g02002 | 373 | MobiDBLite | consensus disorder prediction | 191 | 213 | - | - | |
Car04g02002 | 373 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 225 | 285 | IPR017930 | - | |
Car04g02002 | 373 | MobiDBLite | consensus disorder prediction | 183 | 232 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02002 | Car-Chr4:15542845 | Car18g00967 | Car-Chr18:10226071 | 1.03E-87 | dispersed | |
Car12g01201 | Car-Chr12:11449072 | Car04g02002 | Car-Chr4:15542845 | 1.43E-46 | dispersed | |
Car15g00854 | Car-Chr15:4960227 | Car04g02002 | Car-Chr4:15542845 | 5.58E-169 | wgd | |
Car04g01570 | Car-Chr4:9097331 | Car04g02002 | Car-Chr4:15542845 | 9.35E-92 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3418 | PF00249 | Myb_DNA-binding | 1.60E-06 | CL0123 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02002 | - | - | cpep:111786881 | 477.633 |