Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02046 ATGGCGGCCGCTCAACAGACTCCTTTCTTACGCTCCCGTCAGCCCTCCAACACTGACGGCTCTACTTCCCCCATCGGCCCCCTCGCTGTTCTCTTGGGCCGTGCCACTGGCCGCCGTGGAACTTCTATGGTAGTACGAGAGACGGCGGCACGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTACTCCAAGCCGGTTGTGGCGGTTGACATTGCGTGGAATTTGGCTTTCGTTTTCGTTTCGTTGGGTGTGCTTATTCACTCGGTCGATGAAAAACCCAATACGCCAATTCGGCTTTGGATTTTAGTTTATGTGGCTCAGTGTTTGGTGCACTCTGTGCTTGTGTGGTTAGAGTTTAGAAGGAGGAATGCGAGGAGGGCTATGGATATGGAGACGCCGCAACACCCGCAACCTGATATTGACGGATATTTTTCTAATGAAAGCAATGACGAAGATGGTAGCCCGAGGAATCTGTCCGGTGTTGCCAAAAGATGTGAGACAGTGAACACCTTGGTATCGTTAATTTGGTGGTTACTTGGCTTTTATTGGGTCATGGCTGGTGGTAACCTCCTCCTGCAGAATGCTCCATCTTTATACTGGCCTCATGCTACAGTAGCGCAATTATGGAATAGTTCAAATGCCGCCTGGGGTTTGGGGCTTCATCACAAACTTACTGATCCGGAGATTTTCCTTGTCATCCATTCGCTCATTGCTCTTTTGCTTCATAATTTTGTGCAACTATGCTTGATGCTTTTGAATGGTCCACGGGCTTACCAAACACCTTTCACTAACCTGCTGGCTGTCGTATTTCTGGCATTTGATGTGTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGAATAGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGCAGGAAGGTGCAACTGAGGCAGATTTAAGTACTCTTTCTAAGTATAGATATCAAGTATCCAACAATCCTTCTCCCGGCGACGGGTTGATGGTTCCAATGGAAACAAGCAGCCGATACTTGACGACTGAACATGTTCTATTACGAGAGGATGCGGAGTGTTGTATATGTCTTAGTTCATATGAGGACGGAGTCGAGCTTCATGCTCTTCCCTGCAACCACCATTTTCATTACACGTGTAGCGCAAAATGGCTGAAGATGAATGCAACCTGCCCTCTGTGCAAGTACAACATATTAAAAAACTGTGAACCTGTGTAA 1242 47.42 MAAAQQTPFLRSRQPSNTDGSTSPIGPLAVLLGRATGRRGTSMVVRETAARELEERRIDWGYSKPVVAVDIAWNLAFVFVSLGVLIHSVDEKPNTPIRLWILVYVAQCLVHSVLVWLEFRRRNARRAMDMETPQHPQPDIDGYFSNESNDEDGSPRNLSGVAKRCETVNTLVSLIWWLLGFYWVMAGGNLLLQNAPSLYWPHATVAQLWNSSNAAWGLGLHHKLTDPEIFLVIHSLIALLLHNFVQLCLMLLNGPRAYQTPFTNLLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQQEGATEADLSTLSKYRYQVSNNPSPGDGLMVPMETSSRYLTTEHVLLREDAECCICLSSYEDGVELHALPCNHHFHYTCSAKWLKMNATCPLCKYNILKNCEPV 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16651586 16656906 + Carg26052-RA Car04g02046 147471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02046 413 MobiDBLite consensus disorder prediction 1 24 - -
Car04g02046 413 ProSiteProfiles Zinc finger RING-type profile. 362 403 IPR001841 -
Car04g02046 413 MobiDBLite consensus disorder prediction 131 157 - -
Car04g02046 413 MobiDBLite consensus disorder prediction 139 155 - -
Car04g02046 413 MobiDBLite consensus disorder prediction 1 26 - -
Car04g02046 413 Pfam Ring finger domain 361 403 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02046 Car-Chr4:16651586 Car06g00644 Car-Chr6:3862694 9.88E-78 dispersed
Car04g02046 Car-Chr4:16651586 Car14g01816 Car-Chr14:14162160 2.19E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02046 - K13148 gmx:100816519 334.724