Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02063 ATGGGCAAAGCAAGCGGTGAGGAAGCTGATTCAATCATTCAGAAGAAACCGGTTCACGCCATTTTCCATTCCCAAACCCTCTCATTCTCTTTCCACCTTCACCCAATTTTCTACCCACCTCTCCTCCACGGACCACAACCACTTTATCCGCCGCCGCTGTCGGAAGACCAGATGAAGAGGGAGCATCATCATCTTCATCCTCGCCCGGAGCCGCCTTCCATGCCTGCCGCTCCTAATGGAGACACTTATTTGAATACTGGAAAGGCTAAGCTCTGGGAGGAGGACGCCCAGCTCGATGGAGGAATGGATGAGCTTCTCGCTGTTTTGGGTTACAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCGCAGAAGCTCGAACAGCTTGAAGAAGCTATGTGTCAAGTTCAGGATACTGGCCTTTCGCATCTAGCTTTCGATACTGTTCACTATAATCCCTCTGATCTGTCGACTTGGCTTGAAAGTATGATAACGGAGCTTCATCCCCCGCCGCCTAGTTTTCCGCAGCCGCCTCCCTCGCAGATGAACGATTCGTCGTTTTTAGCCCCGGCGGAATCCTCCACCATCACTTCCATTGATTACGACCCCCAACGACAGACCAGTAGCCTGATTTTTGAGGAGTCTTCCAGTTCTGATTACGACCTTAAAGCTATTACGAGCAGCGCGATTTATTCACCAAGAGAGAACAAGCGTTTGAAACCCTCGTCCGAGTCGGACTCGGATTTATTCTCTACCTCGGCGATTGGGGCATCCGATTCTACAACTCGCCCCATAGTTCTCGTCGACTCGCAGGAGAACGGAATTCAACTGGTTCATGCTTTGATGGCCTGCGCCGAAGCCGTGCAGCAGAACAATCTGAATCTGGCGGAGGCTCTGGTGAAGCGAATCGGGTACTTGGCGGTTTCTCAAGCCGGAGCGATGCGGAAGGTCGCCACATTCTTTGCCGAAGCATTGGCACGCCGAATCTATAGGGTCTGCCCTGAAAATCCCCTCGATCATTCAATGTCCGATATGCTTCAATTGCATTTCTACGAGAGCTGTCCGTATTTGAAATTCGCACATTTCACCGCGAATCAAGCGATTCTTGAGGCCTTCGAAGGGAAGAAGCGCGTTCACGTAATCGATTTCTCGATGAACCAAGGGATGCAGTGGCCGGCTCTGCTTCAAGCCCTAGCTCTACGGCCGAGTGGTCCCCCAGCCTTCCGTCTCACCGGGATCGGACCTCCGGCGCCGGATAACTCCGATTACCTTCAAGAAGTCGGTTGGAAACTCGCTAAATTAGCCGAAACCATCAATGTCGAGTTCGAATACAGAGGATTCGTGGCGAATAGCTTGGCGGATCTGGACGCGTCGATGCTGGAGCTCCGACCGAGCGAGGTGGAGTCAGTGGTGGTAAACTCAGTGTTCGAGTTGCATAAGCTACTGGCTCGGCCGGGCGCCATCGAAAAGGTTATGTCGGTAGTGAAGCAGATGAAGCCGGAGATCATGACGGTGGTGGAGCAGGAAGCCAACCACAACGGTCCGGTTTTCATGGATCGGTTCACTGAGTCACTCCATTACTACTCGACGCTTTTTGACTCGTTGGAGAGCTCGCCCAACAACCAGGACAAGATGATGTCGGAAATGTACCTCGGAAAGCAAATTTGCAACGTGGTGGCTTGTGAAGGCAGCGACCGAGTGGAGCGGCACGAGACTCTGACTCAGTGGCGAACTCGGTTTTGCTCCTCTGGGTTCGAGCCCATCCATCTGGGCTCCAATGCATTCAAGCAAGCAAGTATGCTCCTCGCCCTATTCGGCAGCGGAGAAGGATACCGAGTGGAAGAGAACAACGGATCACTAACGCTGGGGTGGCACACCCGCCCCCTCATCGCCACCTCCGCCTGGAAACTCGGGAACAACTCGGCGGTGGTAACTCACTGA 1938 53.3 MGKASGEEADSIIQKKPVHAIFHSQTLSFSFHLHPIFYPPLLHGPQPLYPPPLSEDQMKREHHHLHPRPEPPSMPAAPNGDTYLNTGKAKLWEEDAQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWLESMITELHPPPPSFPQPPPSQMNDSSFLAPAESSTITSIDYDPQRQTSSLIFEESSSSDYDLKAITSSAIYSPRENKRLKPSSESDSDLFSTSAIGASDSTTRPIVLVDSQENGIQLVHALMACAEAVQQNNLNLAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYRVCPENPLDHSMSDMLQLHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDYLQEVGWKLAKLAETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQDKMMSEMYLGKQICNVVACEGSDRVERHETLTQWRTRFCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIATSAWKLGNNSAVVTH 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16797082 16800023 + Carg25237-RA Car04g02063 147488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02063 645 Pfam GRAS domain family 276 635 IPR005202 -
Car04g02063 645 MobiDBLite consensus disorder prediction 234 254 - -
Car04g02063 645 ProSiteProfiles GRAS family profile. 267 635 IPR005202 -
Car04g02063 645 MobiDBLite consensus disorder prediction 55 69 - -
Car04g02063 645 MobiDBLite consensus disorder prediction 166 186 - -
Car04g02063 645 Pfam Transcriptional regulator DELLA protein N terminal 103 170 IPR021914 -
Car04g02063 645 Coils Coil 111 131 - -
Car04g02063 645 MobiDBLite consensus disorder prediction 48 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02063 Car-Chr4:16797082 Car15g00691 Car-Chr15:3844754 0 dispersed
Car17g00989 Car-Chr17:7920580 Car04g02063 Car-Chr4:16797082 1.50E-47 dispersed
Car15g00905 Car-Chr15:5503250 Car04g02063 Car-Chr4:16797082 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3423 PF03514 GRAS 1.80E-136 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02063 K14494 - csv:101204164 1037.33