Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g02064 | ATGGAACACTTCTTGGGTCTTCTCCGAATTCGGGTGCTGCGCGGTTCTAATCTGGCTGTTCGTGATACTCGTAGCAGTGATCCTTTTGTCGTCGTCACTATGGGCGATACGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAACTGACTCTTTCTATTGCAGATCTTAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACAGTAACAGACCATGACAAAATGGGAGATGCCGCAATTGACATCGAACCATACATCGAATGTCTGAAGATGGGACTGGAAAGCCTCCCAGAGGGGTGTGTGGTTAAGAGGGTATATCCAAGCAGAACAAACGACTTAGCTGATGAGAGCCAATGTGTTTGGAACAAAGGGAAAATTATACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGAAATTCAGCTCGAATGGATCGATGTTCCGGGATCTAAGGGTCTGCCGAAAGAGGGTATGAGCCACTTCTAA | 522 | 45.4 | MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSIADLRTPIGLSVYDKDTVTDHDKMGDAAIDIEPYIECLKMGLESLPEGCVVKRVYPSRTNDLADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 16803954 | 16806479 | - | Carg25238-RA | Car04g02064 | 147489 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g02064 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Car04g02064 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| Car04g02064 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Car04g02064 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Car04g02064 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 158 | IPR035892 | - | |
| Car04g02064 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - | |
| Car04g02064 | 173 | Gene3D | C2 domain | 4 | 169 | IPR035892 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g02064 | Car-Chr4:16803954 | Car10g00310 | Car-Chr10:1521794 | 3.34E-71 | dispersed | |
| Car04g00059 | Car-Chr4:314989 | Car04g02064 | Car-Chr4:16803954 | 4.07E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g02064 | - | - | csv:101204404 | 305.834 |