Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02087 ATGGAAAGAATCCTCTCTACTTTGGCAATGATTTTTATCTTATTTGCTTTGGCTTCTTCAGCTGAACAAGAGGCTGTGAGTTCAATAAAAACTGATGCTGCAGCTCTTCTTAAGTTCAAGGACATGATTGACAAGGACCCAAATGGAGTGTTGTCCAGTTGGAAGCTTGAGAACAATCCATGTTCATGGTATGGAGTTTCATGCCAATCCGGAAGAGCAATTGCTCTTGATCTGAGTGGTTGTAATCTTGCAGGGAATGTTCATTTTGATCCTCTGTCTTCTCTGGATATGTTGTTGGCTTTGAATTTGTCTACAAATTCTTTCACTATAAACTCAACTACTTTGCTTCATCTTCCTTATAATTTGCAGCAACTTGAGCTCTCTCTTGCCAAAGTTGTAGGTAGTGTGCCAGAGAATCTTTTCTATAAGTGTCCAAATCTTATGTTTGTAGACCTTTCATTCAACAATCTTACAAGCTATCTGCCTGAAAATCTTCTGTTTAATGCTAATAAGCTTCAAGATCTTGATCTCTCCTACAACAATCTAACTGGGTCGATCTCAGGATTAAGAATATATGAGAATTCTTGCAGCTCTTTGTTGCGCATTGAGCTTTCGGGGAATCAAATTGTCGGTTCGATTCCGAGTGGTATTTCGAACTGCTCGAATCTGCAAACGCTTGGTATGTCAAACAATTTTCTCAGTGGGGATATCCCCAGATCTTTAGGGGAAATCAGCAGTTTACAGAGGGTGGATCTATCTCACAATCAGCTCACTGGTTGGCTTCCTTCTGATTGGAGAAATGCCTGCAATTCACTTCAAGAACTAAGGCTTAGCTACAACAACATTTCTGGTGCAATTCCAGCTTCCTTCTCTGCTTGTTCTTGGCTGCAAATTTTGGATCTTTCAAATAACAATCTATCTGGTCCTTTACCGGATTCCATCTTCAAGAATCTTGTCTCTTTACAAAGCTTGCTATTGAGTAATAACATTATCTCTGGATCATTGCCTTCATCCATATCTCACTGCAAGAATCTGCAGCTTGTAGACTTAAGTTCCAATAGAATTTCTGGATTGATCTCACCAGATATATGTCCAGGTGCTGAGTCACTTCAGGAACTGAAAATTCCAGACAATCTCATCGTAGGAGGAATCCCACCTGAGCTCTCACTGTGTCCACAGCTAAAGACAATTGATTTTAGTTTAAACTATCTGAAAGGCTCCATACCAGCAGAGCTTGGAAAGCTTCAGAATCTTGAACAGCTGATAGCATGGTTCAATGGTTTAGAAGGGAAAATACCTTCAGAATTGGGGAAATGTAGAAACTTGAAGGATCTTATACTTAATAACAATCATTTAAGTGGTGAAATCCCCACTGGATTGTTCAGTTGTAGCAATCTTGAATGGATTTCACTCACGAGTAATGAATTAACTGGTGAGATCCCAAAAGAATTTGGTCTTTTGCCAAGGCTGGCTGTCCTGCAACTTGGAAACAATAGTTTAAGTGGTCAGATACCAGCGGAGTTGGCAAAATGCAGCACTTTGGTTTGGTTGGATTTGAACAGCAATAAGCTTACAGGGGAAATACCACCTAGACTTGGCAGGCAGCTTGGAGCCAAATCATTGAATGGGATTCTTTCTGGAAACACTCTAGTGTTTGTTCGAAACGTCGGGAATTCGTGTAAAGGAGTCGGGGGCTTGTTAGAGTTTTCTGGAATCAGACCTGAAAGACTACAGCAAGAACCAACATTGAAGACCTGTGATTTCACTAGATTGTACTCTGGTCCAGTCCTCAGTTTGTTTACAAAGTACCAAACTTTGGAGTACTTGGATCTTTCTTACAATGAGCTTCGTGGGAGAATACCAGAAGAGTTCGGAGATATGGTTGCCTTACAGGTTCTAGAATTATCACACAACCAACTTTCTGGAGAGATTCCAGCATCGTTCGGTCGCCTAAAGAACTTAGGAGTGTTTGATGCATCATATAACAGACTGCAGGGTCATATTCCAGATTCATTTTCAAACTTATCATTCTTAGTGCAAATTGATCTATCTTATAATGAACTAACAGGGCGAATTCCATCAAGGGGGCAGCTCAGTACACTACCTGCAAGTCAGTATGCAAACAATCCAGGACTTTGTGGAGTTCCTTTGCCTGAATGCCAGAGTGAAGACCAGCCGGCGACAAGTCCTAATGTAGATGCTGGAAAAGGAAGAACAAAGCCAGAATCAGTGTCATGGGTTAATAGTATTGTTTTAGGTGTTCTTATTTCCATTGCCTGTGTGTGCATTTTGATTGTATGGGCTATTGCCATGCGTGCAAGACGAAAAGAAGAAGAGGAAGTGAAGATGCTTAATAGTTTACAAGCAATACATGCCCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCACTGAGTATCAATGTGGCAACTTTCCAAAGACAGCTAAGAAAGCTCAAGTTCTCCCAACTGATAGAAGCAACTAATGGCTTCTCAGCAGAAAGTCTCATTGGTAGTGGCGGGTTCGGTGAAGTGTTTAAAGCAACACTAAAGGATGGATCGAGCGTTGCAATCAAGAAACTGATACGTCTTAGTTGCCAGGGAGACCGTGAATTCATGGCGGAGATGGAAACCTTAGGAAAGATCAAACATGGAAATCTAGTACCTCTTCTGGGATACTGTAAAATAGGTGAGGAGAGGCTGCTAGTGTATGAGTTCATGAAGTTCGGTAGCCTAGAAGAGATGCTTCATGGAAGAGCAAAGATGCAAGATAGCAGAATTCTAACATGGGATGAAAGGAAAAAGATAGCCAGAGGTGCTGCTAAAGGACTCTGTTTCCTACACCATAACTGCATTCCACACATAATTCACAGAGACATGAAGTCCAGCAATGTACTTCTGGACCATGATTTAGACGCAAGAGTTTCAGATTTTGGAATGGCAAGGCTGATAAGTGCTCTTGACACCCATCTGAGTGTAAGCACACTTGCAGGCACTCCTGGTTATGTCCCTCCTGAGTACTACCAAAGCTTCAGGTGCACAGCAAAAGGCGACGTCTATTCGTTCGGTGTCGTTCTCTTAGAACTCTTGACAGGGAAACGACCAACTGATAAGGAGGATTTTGGGGACACCAATTTGGTGGGTTGGGTCAAAATGAAAGTCAATGATGGAAAACAAATGGAAGTGATAGATCCAGAGTTGCTTTCAGTGACCAAAACAAGTGACGAATCAGAAGCAGAAGAAGTTAAAGAAATGGTTAGATATTTGGAGATAACTCTTCGGTGTGTTGAAGAGTTCCCTTCCAAAAGGCCTAACATGTTGCAGGTGGTAGCCATGCTACGAGAGTTGATGCCTGGATCAACTAATGGAAGCAGCAACAGTGCTTGA 3387 41.63 MERILSTLAMIFILFALASSAEQEAVSSIKTDAAALLKFKDMIDKDPNGVLSSWKLENNPCSWYGVSCQSGRAIALDLSGCNLAGNVHFDPLSSLDMLLALNLSTNSFTINSTTLLHLPYNLQQLELSLAKVVGSVPENLFYKCPNLMFVDLSFNNLTSYLPENLLFNANKLQDLDLSYNNLTGSISGLRIYENSCSSLLRIELSGNQIVGSIPSGISNCSNLQTLGMSNNFLSGDIPRSLGEISSLQRVDLSHNQLTGWLPSDWRNACNSLQELRLSYNNISGAIPASFSACSWLQILDLSNNNLSGPLPDSIFKNLVSLQSLLLSNNIISGSLPSSISHCKNLQLVDLSSNRISGLISPDICPGAESLQELKIPDNLIVGGIPPELSLCPQLKTIDFSLNYLKGSIPAELGKLQNLEQLIAWFNGLEGKIPSELGKCRNLKDLILNNNHLSGEIPTGLFSCSNLEWISLTSNELTGEIPKEFGLLPRLAVLQLGNNSLSGQIPAELAKCSTLVWLDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPASFGRLKNLGVFDASYNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSEDQPATSPNVDAGKGRTKPESVSWVNSIVLGVLISIACVCILIVWAIAMRARRKEEEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMKFGSLEEMLHGRAKMQDSRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLDARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKTSDESEAEEVKEMVRYLEITLRCVEEFPSKRPNMLQVVAMLRELMPGSTNGSSNSA 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17006651 17010037 - Carg25261-RA Car04g02087 147512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02087 1128 ProSitePatterns Protein kinases ATP-binding region signature. 837 860 IPR017441 GO:0005524
Car04g02087 1128 Pfam Brassinosteroid receptor island domain 542 600 IPR045381 -
Car04g02087 1128 Pfam BspA type Leucine rich repeat region (6 copies) 128 231 IPR026906 -
Car04g02087 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Car04g02087 1128 ProSiteProfiles Protein kinase domain profile. 831 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02087 1128 MobiDBLite consensus disorder prediction 717 738 - -
Car04g02087 1128 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Car04g02087 1128 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Car04g02087 1128 Pfam Leucine rich repeat 271 329 IPR001611 GO:0005515
Car04g02087 1128 Pfam Leucine rich repeat 440 500 IPR001611 GO:0005515
Car04g02087 1128 Pfam Leucine rich repeat 599 640 IPR001611 GO:0005515
Car04g02087 1128 Pfam Protein kinase domain 833 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02087 Car15g00825 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00947 Car-Chr3:7362638 Car04g02087 Car-Chr4:17006651 0 dispersed
Car04g02087 Car-Chr4:17006651 Car16g00121 Car-Chr16:709313 5.15E-13 dispersed
Car07g00754 Car-Chr7:3915981 Car04g02087 Car-Chr4:17006651 3.96E-06 dispersed
Car07g00755 Car-Chr7:3917881 Car04g02087 Car-Chr4:17006651 1.70E-29 dispersed
Car10g00198 Car-Chr10:962190 Car04g02087 Car-Chr4:17006651 7.60E-152 transposed
Car15g00813 Car-Chr15:4594990 Car04g02087 Car-Chr4:17006651 6.65E-70 transposed
Car15g00825 Car-Chr15:4698262 Car04g02087 Car-Chr4:17006651 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88836 PF00069 Pkinase 1.40E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02087 - - csv:101208987 2049.25