Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02093 | ATGGTGCTCTCCAAAACTTTCTCAGAGTCGGATGTCTCTGTTCATTCCACCTTTGCCTCTCGCTATGTGCGGGACTCTGCTCCAAGATTCACCATGCCCGAAAACTCCATGCCCAAGGAGGCTGCTTTCCAAATCATCAACGACGAGCTCATGCTCGATGGCAACCCCAGGCTCAATTTGGCTTCCTTCGTCACCACTTGGATGGAGCCCGAGTGCGATAAGCTGGTGATGGACTCTGTCAACAAGAACTACGTCGATATGGACGAGTACCCTGTACCCACCGAGCTTCAGAATCGATGTGTCAATATGATTGCCCATCTCTTCAACGCTCCCTTGGGAGATTCCGACACGGGCGGTTGGAGTTGGCACGGTGGGATCCTCGGAGGCCATCATGTTGGCGGGATTGGCCTTCAAGAGGGAAGTGGCAGAACAAGCGGAAAGCAGAGGGGAAGCCTTCCGAATATCGTGACAGGGGCGAATGTTCAAGTTTGTTGGGAGAAATTCGCGAGGTACTTTGAAGTGGAGCTGAAGGAAGTGAAGGTGAGAGAAGGGTATTACGTGATGGACCTGTCAAGCGGTGGAGATGGTGATGAGAACACCATTTGCGTCGCTGCCATTTTGGGGTCGACTTACAATGGGGAATTCGAAGATGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAACAAGAAAACAGGGTGGGATACTCCCATTCATGTGGATGCTGCCAGCGGTGGATTCATAGCGCCACCTCGAATGGGACTTCCGGCTTCCATTGGTGAAGAGCATCAATGTGATATGGGCTTGTCTACGCCGGAATTGGATGGGTCATTTTGGAGAACCAAAGAGGATTTGCCTGAAGAGCTGATTTTCCACATAAATTACCTCGGAGCGGATCAACCCACCTTCACTCTCAACTTCTCCAAAGATCATCCCAATTTCTCTAATCAAACTCCATTTCCTCCCCATCAACAGTCTAATAATTTCCCCATCAATCCGTTTTCAGGGTCTAGCCAAATCATCGCTCAGTATTACCAACTAATCCGCTTGGGTTTCGAGGGGTATCAGAACGTGATGCAGAATTGTCACGACAACGCAATGGTGCTGAAGGAAGGGCTTGAAAAAACAGGAAGGTTCAGCATAGCATCGAAGGACATGGGGGTGCCAGTGGTGGCATTCTCTCTGAAAGACAGAAGCCGGCACGACGAATTCGAGGTGTCGGAAATGCTGCGACGGTTCGGGTGGATCGTACCGGCATACCCAATGCCAGAGGGGGCGAAGCATGTGTCAGTTCTTCGCGTGGTGATCAGAGAAGACTTCTCGCGCACTCTTGCAGAGCGGCTGGTGCTTGATATCATCAAAGTGTTAGCCGAGCTTGATACTCTGCCACCCAAGAACAGTGGAAAATCGACAAGCTTAGAAGACGGCAAAAAAGAGAAGGCAAAGGAAACAGAGAGGGAAATAGCAAGTTATTGGAGGAATATAACCAAGGCTAGGAAGATCAAGCTTGCTGCAAATCAAGCTGGTCCTTCCGTTACCGTAATTGCCAAATGA | 1554 | 49.87 | MVLSKTFSESDVSVHSTFASRYVRDSAPRFTMPENSMPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLVMDSVNKNYVDMDEYPVPTELQNRCVNMIAHLFNAPLGDSDTGGWSWHGGILGGHHVGGIGLQEGSGRTSGKQRGSLPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDLSSGGDGDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPPRMGLPASIGEEHQCDMGLSTPELDGSFWRTKEDLPEELIFHINYLGADQPTFTLNFSKDHPNFSNQTPFPPHQQSNNFPINPFSGSSQIIAQYYQLIRLGFEGYQNVMQNCHDNAMVLKEGLEKTGRFSIASKDMGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLAERLVLDIIKVLAELDTLPPKNSGKSTSLEDGKKEKAKETEREIASYWRNITKARKIKLAANQAGPSVTVIAK | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17086712 | 17088396 | - | Carg17700-RA | Car04g02093 | 147518 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02093 | 517 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 311 | - | - | |
Car04g02093 | 517 | PANTHER | GLUTAMATE DECARBOXYLASE | 328 | 501 | - | - | |
Car04g02093 | 517 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 311 | IPR010107 | GO:0004351|GO:0006536|GO:0030170 | |
Car04g02093 | 517 | PANTHER | GLUTAMATE DECARBOXYLASE | 328 | 501 | IPR010107 | GO:0004351|GO:0006536|GO:0030170 | |
Car04g02093 | 517 | MobiDBLite | consensus disorder prediction | 471 | 485 | - | - | |
Car04g02093 | 517 | Gene3D | - | 376 | 463 | - | - | |
Car04g02093 | 517 | Pfam | Pyridoxal-dependent decarboxylase conserved domain | 335 | 396 | IPR002129 | GO:0016830|GO:0019752|GO:0030170 | |
Car04g02093 | 517 | Pfam | Pyridoxal-dependent decarboxylase conserved domain | 33 | 310 | IPR002129 | GO:0016830|GO:0019752|GO:0030170 | |
Car04g02093 | 517 | MobiDBLite | consensus disorder prediction | 466 | 485 | - | - | |
Car04g02093 | 517 | SUPERFAMILY | PLP-dependent transferases | 15 | 459 | IPR015424 | - | |
Car04g02093 | 517 | Gene3D | - | 1 | 65 | - | - | |
Car04g02093 | 517 | Gene3D | - | 66 | 375 | IPR015421 | GO:0003824 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g02093 | Car15g00822 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02093 | Car-Chr4:17086712 | Car15g00712 | Car-Chr15:3952208 | 0 | dispersed | |
Car04g02093 | Car-Chr4:17086712 | Car04g02094 | Car-Chr4:17092715 | 0 | tandem | |
Car15g00821 | Car-Chr15:4669021 | Car04g02093 | Car-Chr4:17086712 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02093 | K01580 | - | csv:101208026 | 754.977 |