Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02093 ATGGTGCTCTCCAAAACTTTCTCAGAGTCGGATGTCTCTGTTCATTCCACCTTTGCCTCTCGCTATGTGCGGGACTCTGCTCCAAGATTCACCATGCCCGAAAACTCCATGCCCAAGGAGGCTGCTTTCCAAATCATCAACGACGAGCTCATGCTCGATGGCAACCCCAGGCTCAATTTGGCTTCCTTCGTCACCACTTGGATGGAGCCCGAGTGCGATAAGCTGGTGATGGACTCTGTCAACAAGAACTACGTCGATATGGACGAGTACCCTGTACCCACCGAGCTTCAGAATCGATGTGTCAATATGATTGCCCATCTCTTCAACGCTCCCTTGGGAGATTCCGACACGGGCGGTTGGAGTTGGCACGGTGGGATCCTCGGAGGCCATCATGTTGGCGGGATTGGCCTTCAAGAGGGAAGTGGCAGAACAAGCGGAAAGCAGAGGGGAAGCCTTCCGAATATCGTGACAGGGGCGAATGTTCAAGTTTGTTGGGAGAAATTCGCGAGGTACTTTGAAGTGGAGCTGAAGGAAGTGAAGGTGAGAGAAGGGTATTACGTGATGGACCTGTCAAGCGGTGGAGATGGTGATGAGAACACCATTTGCGTCGCTGCCATTTTGGGGTCGACTTACAATGGGGAATTCGAAGATGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAACAAGAAAACAGGGTGGGATACTCCCATTCATGTGGATGCTGCCAGCGGTGGATTCATAGCGCCACCTCGAATGGGACTTCCGGCTTCCATTGGTGAAGAGCATCAATGTGATATGGGCTTGTCTACGCCGGAATTGGATGGGTCATTTTGGAGAACCAAAGAGGATTTGCCTGAAGAGCTGATTTTCCACATAAATTACCTCGGAGCGGATCAACCCACCTTCACTCTCAACTTCTCCAAAGATCATCCCAATTTCTCTAATCAAACTCCATTTCCTCCCCATCAACAGTCTAATAATTTCCCCATCAATCCGTTTTCAGGGTCTAGCCAAATCATCGCTCAGTATTACCAACTAATCCGCTTGGGTTTCGAGGGGTATCAGAACGTGATGCAGAATTGTCACGACAACGCAATGGTGCTGAAGGAAGGGCTTGAAAAAACAGGAAGGTTCAGCATAGCATCGAAGGACATGGGGGTGCCAGTGGTGGCATTCTCTCTGAAAGACAGAAGCCGGCACGACGAATTCGAGGTGTCGGAAATGCTGCGACGGTTCGGGTGGATCGTACCGGCATACCCAATGCCAGAGGGGGCGAAGCATGTGTCAGTTCTTCGCGTGGTGATCAGAGAAGACTTCTCGCGCACTCTTGCAGAGCGGCTGGTGCTTGATATCATCAAAGTGTTAGCCGAGCTTGATACTCTGCCACCCAAGAACAGTGGAAAATCGACAAGCTTAGAAGACGGCAAAAAAGAGAAGGCAAAGGAAACAGAGAGGGAAATAGCAAGTTATTGGAGGAATATAACCAAGGCTAGGAAGATCAAGCTTGCTGCAAATCAAGCTGGTCCTTCCGTTACCGTAATTGCCAAATGA 1554 49.87 MVLSKTFSESDVSVHSTFASRYVRDSAPRFTMPENSMPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLVMDSVNKNYVDMDEYPVPTELQNRCVNMIAHLFNAPLGDSDTGGWSWHGGILGGHHVGGIGLQEGSGRTSGKQRGSLPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDLSSGGDGDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPPRMGLPASIGEEHQCDMGLSTPELDGSFWRTKEDLPEELIFHINYLGADQPTFTLNFSKDHPNFSNQTPFPPHQQSNNFPINPFSGSSQIIAQYYQLIRLGFEGYQNVMQNCHDNAMVLKEGLEKTGRFSIASKDMGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLAERLVLDIIKVLAELDTLPPKNSGKSTSLEDGKKEKAKETEREIASYWRNITKARKIKLAANQAGPSVTVIAK 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17086712 17088396 - Carg17700-RA Car04g02093 147518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02093 517 PANTHER GLUTAMATE DECARBOXYLASE 1 311 - -
Car04g02093 517 PANTHER GLUTAMATE DECARBOXYLASE 328 501 - -
Car04g02093 517 PANTHER GLUTAMATE DECARBOXYLASE 1 311 IPR010107 GO:0004351|GO:0006536|GO:0030170
Car04g02093 517 PANTHER GLUTAMATE DECARBOXYLASE 328 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Car04g02093 517 MobiDBLite consensus disorder prediction 471 485 - -
Car04g02093 517 Gene3D - 376 463 - -
Car04g02093 517 Pfam Pyridoxal-dependent decarboxylase conserved domain 335 396 IPR002129 GO:0016830|GO:0019752|GO:0030170
Car04g02093 517 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 310 IPR002129 GO:0016830|GO:0019752|GO:0030170
Car04g02093 517 MobiDBLite consensus disorder prediction 466 485 - -
Car04g02093 517 SUPERFAMILY PLP-dependent transferases 15 459 IPR015424 -
Car04g02093 517 Gene3D - 1 65 - -
Car04g02093 517 Gene3D - 66 375 IPR015421 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02093 Car15g00822 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02093 Car-Chr4:17086712 Car15g00712 Car-Chr15:3952208 0 dispersed
Car04g02093 Car-Chr4:17086712 Car04g02094 Car-Chr4:17092715 0 tandem
Car15g00821 Car-Chr15:4669021 Car04g02093 Car-Chr4:17086712 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02093 K01580 - csv:101208026 754.977