Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02124 ATGGGTGTTGCTGTTGAAACCACTCGGTTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATCGGAAATTGATCGAGCGCCTCCTCAAAACCTCCTCCTATCACGTTACTGCTGTTGATTCCGGTACCAAGGCGTTGGAATTTCTCGGTCTTGTTGAAGATCCTGATCTCGATGATGATGATGATGAACAACACTCCAAACTCCCCCCCTCAATTCAAGAAGTGGATGTGAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCAGTTGTGATCATGTCCTCTGAGAATGTTCCTTCGAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCCGATGTCAGGAAACTGAGACCTCATTTGATTAAAGAAAAATCCACAAGGAATTGA 474 43.67 MGVAVETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDPDLDDDDDEQHSKLPPSIQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSTRN 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17295013 17296000 + Carg17731-RA Car04g02124 147549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02124 157 ProSiteProfiles Response regulatory domain profile. 11 150 IPR001789 GO:0000160
Car04g02124 157 Pfam Response regulator receiver domain 72 144 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02124 Car-Chr4:17295013 Car14g00475 Car-Chr14:2529750 3.74E-69 dispersed
Car15g00784 Car-Chr15:4455898 Car04g02124 Car-Chr4:17295013 3.78E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3430 PF00072 Response_reg 4.60E-16 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02124 K14492 - csv:101210839 242.276