Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02137 ATGGAATTCGGGCTTCGTTGTGGAACTGGAGGTCGAAGCTGCGAAGTTCTTCAGCTTTCTCTTCTCCTATTTTGGGCTGAAACTGCAAACTGGACTAAATTTCTCTCTGTAATCCTCTGGTTCTCTGTCGAACAACGGCTTCATTTTGAAATTTTGTCTTTGAGCTACGAACTTTTCGGTGTGAGTATTTCTCTGATGCGGCAGCATAACACAGTCTTCTTAAGGATGGCATCTGGAAATCCTTGTTTTGATGATGTGCGGAGCAAAGCAGAGGTTATTGATCCTCCACAAAATCAAGATATGATGGACATCAGGGAAGCTGTGGATGGTCCAACTCAAAATGAACTTAAACCTAATGTTGCTGTTTCCGGCAGTGTTCGCCAGCTTTTGGAATGCCCAGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCGAATGGTCACACACTGTGTTCGGATTGCAAGCCTAGGGTGCACAATCGGTGCCCTACGTGCAGGCACGAACTTGGCAATATTCGATGCCTTGCATTGGAGAAGGTGGCTGCATCGCTAGAACTTCCATGTAAATATCAGAGCTATGGTTGCATTGGCATATATCCTTATTATAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGTTGTCCATATGCTGGATCAGAATGTTTGGTCGTTGGTGATATACCCTATTTGGTGGCCCATCTCAAAGATGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGATACGTAAAATCAAACCCTCAAGAAGTCGAAAACGCAACATGGATGCTAACGAATGTTAAAACTCAGGTTTTCAGTTGCTTTGGTCATTACTTTTGCCTGCATTTCGAAGCTTTCCAGCTCGGAATGGCTCCAGCATACATAGCATTCTTGCGGTTCATGGGCGATGACGATGATGCAAAGAACTACAGCTATAGTCTCGAAGTGGGTGGAAATGGGAGGAAGATAGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGAAAAGTTCGGGATAGTTTCGACGGGCTCATTATCCAATGTAACATGGCTCTCTTCTTCTCTGGTGGAGACCGTAAGGAACTGAAGCTTAGGGTGACTGGTAGAATTTGGAAAGAACAGGAGACTGGGAGAACAGCTTATGATGAAACTTTCAGTTCAAATCCTATCTTCTTATCCAGTAGTCGGTTGCCTTTTTGTAGAGTAAATGAGGCTTTCTAA 1254 44.02 MEFGLRCGTGGRSCEVLQLSLLLFWAETANWTKFLSVILWFSVEQRLHFEILSLSYELFGVSISLMRQHNTVFLRMASGNPCFDDVRSKAEVIDPPQNQDMMDIREAVDGPTQNELKPNVAVSGSVRQLLECPVCLNAMYPPIHQCSNGHTLCSDCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCIGIYPYYSKVKHESQCVYRPYSCPYAGSECLVVGDIPYLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTNVKTQVFSCFGHYFCLHFEAFQLGMAPAYIAFLRFMGDDDDAKNYSYSLEVGGNGRKIVWQGVPRSIRDSHRKVRDSFDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQETGRTAYDETFSSNPIFLSSSRLPFCRVNEAF 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17393376 17398157 + Carg17744-RA Car04g02137 147562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02137 417 ProSiteProfiles Zinc finger RING-type profile. 132 168 IPR001841 -
Car04g02137 417 Pfam Seven in absentia protein family 174 378 IPR018121 GO:0005737|GO:0006511|GO:0007275
Car04g02137 417 ProSiteProfiles Zinc finger SIAH-type profile. 185 245 IPR013010 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02137 Car-Chr4:17393376 Car18g00793 Car-Chr18:9035299 0 dispersed
Car04g02220 Car-Chr4:18032859 Car04g02137 Car-Chr4:17393376 1.10E-18 transposed
Car15g00770 Car-Chr15:4362429 Car04g02137 Car-Chr4:17393376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02137 K04506 - csv:101220834 604.749