Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02143 ATGGCGCTCTCTGATAGACCCTCTCGTCAATCTCTGATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGTACTCTGCCTATTAAGAAGATGCTTCAGTCTTCATCCACTTTTGATGCGGTTTCCTATTCTCCTAAGACCTTTGCTATTCCGGCCCCGAGTGAACCGTCTAAGAAGATTGAGTTGTACTCGCCGGCGTTCTACGCTGCTTGTACTTTTGGTGGGATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGATCGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAATTTTGCTTAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTTCTTGGCTACAGTGCTCAGGGTGCTTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCTGCTAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCGGCTGAGGTGATTGCTGACGTTGCACTTTGCCCTTTCGAAGCAGTCAAGGTTCGGGTTCAAACTCAGCCTGGATTCGCTAGAGGGCTAGCGGATGGACTTCCCAAGTTTGTCAAATCAGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGTCGCCAGATTCCATGTAAGTTAAAAAAGAAAAACACAATGATGAAGTTTGCTTCCTTCGAGACAATTGTCGAGATGATATACAAGTATGCCGTTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTATTAGTTTTGCTGGTGGATATGTGGCTGGTGTCTTCTGTGCTATTGTCTCTCACCCTGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACTGTTGGAGACGTGAGTGCTGCATCCTTTTGGACGGAGTTATACTTGGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTCCGTATCGTCATGATTGGAACTCTTACTGGTGCTCAATGGGGCATTTACGATGCATTCAAAGTGTTCGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCCGCACCTTCTGCTTCTGAGCTTGCAAATGCGTGA 1161 47.72 MALSDRPSRQSLIPSFLYSSPSSTRTLPIKKMLQSSSTFDAVSYSPKTFAIPAPSEPSKKIELYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPCKLKKKNTMMKFASFETIVEMIYKYAVPTPKDQCSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDVSAASFWTELYLAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPSASELANA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17423269 17426271 - Carg17750-RA Car04g02143 147568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02143 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 254 IPR018108 -
Car04g02143 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 362 IPR018108 -
Car04g02143 386 Pfam Mitochondrial carrier protein 168 258 IPR018108 -
Car04g02143 386 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Car04g02143 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02143 Car-Chr4:17423269 Car11g01274 Car-Chr11:10624424 0 dispersed
Car15g00765 Car-Chr15:4337829 Car04g02143 Car-Chr4:17423269 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02143 K15102 - csv:101221771 654.44