Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02200 ATGGAGAAGAACCAACCTGAGAATCCAGACCTTCTTGAGAAAACCAACGATGATGCCCCCAAATTGCCCGCTCATGATGCCGTTCCAGATACTGTTGCTGTTGAATCCGATGTAAAATCTGCAGATAAATTGGAGGATGATAAGGATCAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGACTGAGACGGAAAAGAAGGAGGAGTTGGAGGAGAAGGATGAGTCTAAGGATGAACCGGTTCTTCATTGTGATCTCCACACGATTCTTGAAGACGTAGATCAATTTCTGTTAACTTCTCACGGTTCTCGCGATCGAGAGGAGGATTCTGCTGTGGAGATTCCGAAGTTCATCGACAAGTTCATGGATCTCGTGGATGCGAAGATTGAGCAATACGAGAATACAGAATCGAATGCCAAGGAAAGAGAGTACCGAGTGCCGGAGGACGAATCTTCGTTTCTGGAAGCAGTTAATCGGATATCGAAGCTGAAAAGTGCAATCCACAAAATGAAGTTGGAAGACGAGAAGAATCCGTTGATCAATCGCATCGGGAGCACTCAACAGCGAGCATTTTCTTGTTTGGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAGAAATGGCGATTCGGATCCCGAACCGGATCGTTGTGATGATGCTGACTCCGCTCAACTCCTTTTTCCAGGTTACTCCGGCGAGGTCGTGAGCTATTTGAACAAAATCGCTAACCAAATGATTGCCGGTGGATTCGAATCGGAATGTTGCCAAGTTTACATCGTAGCAAGAAGAAACATATTCGAAGATGCCTTGCAGAAGTTCGGATTCGAGAAATACAGCATTGATGATATACAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTATATGGATCAAAACCATCAAGCATTGCGCCACCGTTTTGTTCTCCGGCGAACGGGATCTCGCCGAATCTGTATTTTCAGCGTATCCTCCAATCTCCGCCAGTCTGTTCAGCAATCTAACTCGCGGCATTGTGATTCAACTCCTAAATTTCTCAGAAGGAGTCGCAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGATGCTCGACATGTACGAAGCTCTTCGTGATCTGGTCCCAAAAATGGAAAACTTATTTCCAGAAGAATCCGCCAACGAGCTCAAAACAGAGTCCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAAAACTCGATCAAAGCCGACACGGGACGAACTCCGGTACCAGGCGGCGCGGTTCATCCATTGACTCGATACACCATGAACTACTTGAAATATGCGTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGATCACGCAAAGATCGAGCGAGCAGATTCCACAAACCGACCACATTTCGAAGGCGAACAACCACCGACTTACAACCACCCTAGCAATGACAATCAATCCCCATTCTCGACGGAACTGACGAAGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCGAAATCAAAGCTGTACAGAGACATAGCACTGAGTTCGATTTTCATGATGAACAACGGGCGATACATCTTGCAGAAAATCAAAGGATCTGCAGAGATTCACGAACTGGTAGGCGATGCTTGGTACAGGAAGAGATCTTCGGAGTTACGCCAGTACCACAAGAACTACCAAAGAGAAACATGGGGAAGATTGTTGGGGTGTTTGAATCACGAGGGTTTGATGGTGCACGGGAAAGTGATAAAGCCAGTGCTGAAGGAGAAGTTCAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAGACGCAAAGCACGTGGGTGATAAGCGACGAGCAGCTTCAATCGGAGCTCCGAGTATCGATATCGGCGGTGATGATTCCGGCGTATAGGTCATTCCTAGCGAGGTTTTCGCAGTACTTGGATCCAGGGAGACAAACGGAGAAATACATTAAGCTACAGCCTGAAGACATAGAAACCTACATAGATGATCTATTCGATGGAAACGCATCCTCCATGGCAAGAAAGAGATGA 2043 46.74 MEKNQPENPDLLEKTNDDAPKLPAHDAVPDTVAVESDVKSADKLEDDKDQEEKEKEKEKETETEKKEELEEKDESKDEPVLHCDLHTILEDVDQFLLTSHGSRDREEDSAVEIPKFIDKFMDLVDAKIEQYENTESNAKEREYRVPEDESSFLEAVNRISKLKSAIHKMKLEDEKNPLINRIGSTQQRAFSCLEEEFRFFLEESRNGDSDPEPDRCDDADSAQLLFPGYSGEVVSYLNKIANQMIAGGFESECCQVYIVARRNIFEDALQKFGFEKYSIDDIQKMSWESMEREIAIWIKTIKHCATVLFSGERDLAESVFSAYPPISASLFSNLTRGIVIQLLNFSEGVAMTKRSAEKLFKMLDMYEALRDLVPKMENLFPEESANELKTESTTARTRLGEAAICIFCDLENSIKADTGRTPVPGGAVHPLTRYTMNYLKYACEYRNTLEQIFKDHAKIERADSTNRPHFEGEQPPTYNHPSNDNQSPFSTELTKVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSAEIHELVGDAWYRKRSSELRQYHKNYQRETWGRLLGCLNHEGLMVHGKVIKPVLKEKFKGFNALFEEIHKTQSTWVISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDDLFDGNASSMARKR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17897097 17899139 - Carg18283-RA Car04g02200 147625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02200 680 MobiDBLite consensus disorder prediction 1 24 - -
Car04g02200 680 MobiDBLite consensus disorder prediction 470 487 - -
Car04g02200 680 Pfam Exo70 exocyst complex subunit 297 667 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g02200 680 Coils Coil 34 78 - -
Car04g02200 680 MobiDBLite consensus disorder prediction 1 79 - -
Car04g02200 680 MobiDBLite consensus disorder prediction 36 79 - -
Car04g02200 680 MobiDBLite consensus disorder prediction 463 487 - -
Car04g02200 680 Coils Coil 121 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02200 Car-Chr4:17897097 Car06g01419 Car-Chr6:10138010 0 dispersed
Car15g00706 Car-Chr15:3929413 Car04g02200 Car-Chr4:17897097 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02200 K07195 - csv:101206040 1059.28