Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02213 ATGAAGATGAAGAGGGAGCTTGAGGATGATAGATCTACTGGTGGTGGTGTTTACGGTGGCGGAAGGCAGGGGGTTGGGAAAGGGGAGTGTTCTTCAGTGTCGGGGGGGAAGGTGAAGATGTGGGAGGAGGAGGAGCAAGAGGTCGGCGGCGGAGGAATGGATGAGTTGCTTGCTGTTTTGGGCTATAAGGTTAGAGCGTCGGACATGGCGGATGTGGCGCAGAAGATGGAGCAACTGGAGATGGTGATGGGATCTGTTAAGGAAGATGGGATTTCTCATCTGGCTTCTGATACTGTTCATTATAATCCTTCTGATCTCTCTGCCTGGATTCAAAATATGCTCTCTGAATTCAGTAATACCCCCAACCATTTCAACTCTTCTTCTACTTCTACTACTCCTCCTCCTCCTCAATCTTCTCAATATTCCAATCCTCACTCACGGATTCAATCCAGGCCTTCGCGGTTGTACGACGACGATTCTGAGTACGATCTTAGCGCCATTCCTGGCGTAGCGGTTTTTCCTTCCAAAGATTCCTCAACAGAAATCGAAACTAATTCTCGCAAGCGAGTGAAAATTGAAGGAGAGAGTTCGGTGAATTTGTTGCCGCCATCGCCACCGTTTGTTGCTGCTGCGGCAGCGGCCGGGATTGTCTCTGAACCTTCTCGGCCGGTGGTGGTTGTGGAGGAGGGCTCGCAAGACGCAGGGATTCAACTCGTTCACACTCTAATGGCCTGCGCCGAGGCCGTGCAGCAAGAAAACATGAAGATCGCTGAGGCATTGGTGAAGCACATCGGATTACTAGCAGTATCGCAAGCCGGAGCGATGAGGAAAGTCGCGACGTATTTTGCCGAAGCCCTAGCTCGTCGGATTTACAGAATCTACTCTCCTCAAGACGGATTTTACTCTTCATACTCCGATATCCTCCAGATGCACTTTTACGAGACCTGTCCGTATCTGAAATTCGCGCATTTCACTGCGAATCAAGCGATTCTCGAAGCATTCGCGACGGCATCGAGAGTTCATGTCATCGATTTCAGTCTCAATCAAGGTATGCAATGGCCGGCGCTGATGCAAGCGCTCGCATTACGGCCAGGAGGTCCGCCGACGTTTCGATTGACTGGAATCGGCCCGCCGAAGCAAGGTAATACGACCGATTCGTTGCAGCAAGTCGGTTGGAAGTTAGCGCAGATGGCGGGGGCCATTGGTGTGGAGTTTGAGTTCAATCAAATCGTGTGCAGTAACCTAGCTAATCTCAATCCGGCGGCACTGGAGATTCGGCCGGCGGCGGTGGAGGCAGTGGCGGTGAATTCGGTGTTCGATCTCCACCGGTTACTGGCTCGGCCTGGAGCGATCGAGAAGGTTTTGGGATCGATAAAAGCAACGAAGCCGAAGATCGTGACGATTGTAGAACAAGAAGCAAACCACAACGGGAGGGTTTTCATGGACCGGTTCACCGAGGCGTTACATTATTACTCAAACATGTTTGACTCACTCGAGGTTTCCTCGACCGGGTTTGAACCGGCAAGTGAGGACGTATTGTTGTCTGAAGTTTATTTAGGAAGGCAGATTTGTAATGTGGTGGCTTGTGAAGGACCAGACCGAGTCGAACGGCACGAGTCGTTAACTCATTGGCGAACTCGGATGGAATCAGCTGGGTTCAACCCGGTTCATCTCGGTTCGAACGCGTTTAAGCAAGCTAGCATGCTTTTGGCCCTCTTTGCTGGAGGAGAGGGGTACAGAGTGGAAGAGAATAATGGCTGTTTGATGCTTGGCTGGCACACTCGACCCTTGATCGCCACGTCAGCTTGGCAGCTCGACGCCGATGAGTCGACCCAGTGA 1839 51.71 MKMKRELEDDRSTGGGVYGGGRQGVGKGECSSVSGGKVKMWEEEEQEVGGGGMDELLAVLGYKVRASDMADVAQKMEQLEMVMGSVKEDGISHLASDTVHYNPSDLSAWIQNMLSEFSNTPNHFNSSSTSTTPPPPQSSQYSNPHSRIQSRPSRLYDDDSEYDLSAIPGVAVFPSKDSSTEIETNSRKRVKIEGESSVNLLPPSPPFVAAAAAAGIVSEPSRPVVVVEEGSQDAGIQLVHTLMACAEAVQQENMKIAEALVKHIGLLAVSQAGAMRKVATYFAEALARRIYRIYSPQDGFYSSYSDILQMHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFSLNQGMQWPALMQALALRPGGPPTFRLTGIGPPKQGNTTDSLQQVGWKLAQMAGAIGVEFEFNQIVCSNLANLNPAALEIRPAAVEAVAVNSVFDLHRLLARPGAIEKVLGSIKATKPKIVTIVEQEANHNGRVFMDRFTEALHYYSNMFDSLEVSSTGFEPASEDVLLSEVYLGRQICNVVACEGPDRVERHESLTHWRTRMESAGFNPVHLGSNAFKQASMLLALFAGGEGYRVEENNGCLMLGWHTRPLIATSAWQLDADESTQ 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17991063 17992901 + Carg18270-RA Car04g02213 147638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02213 612 MobiDBLite consensus disorder prediction 120 150 - -
Car04g02213 612 Pfam GRAS domain family 238 604 IPR005202 -
Car04g02213 612 MobiDBLite consensus disorder prediction 120 160 - -
Car04g02213 612 Pfam Transcriptional regulator DELLA protein N terminal 54 121 IPR021914 -
Car04g02213 612 MobiDBLite consensus disorder prediction 1 37 - -
Car04g02213 612 ProSiteProfiles GRAS family profile. 229 604 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02213 Car-Chr4:17991063 Car15g00905 Car-Chr15:5503250 0 dispersed
Car04g02872 Car-Chr4:21709645 Car04g02213 Car-Chr4:17991063 1.23E-103 transposed
Car15g00691 Car-Chr15:3844754 Car04g02213 Car-Chr4:17991063 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3441 PF03514 GRAS 3.00E-135 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02213 K14494 - csv:101213911 900.197