Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02235 ATGGCTGTTGGCCGATCCTTCGCCTCCATTAAAGGCTACAACATTGATGGGAACAGGGAGATGATTGCTATGGGCTTCATGAACATTATAGGCTCTCTAACCTCTTGCTATGTAGCCACTGGGTCATTCTCAAGAACGGCTGTGAATTTTAGTGCTGGGTGTGAGAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGTTGGCATTGAAATTCTTCACAAGGCTCCTCTACTTCACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCTGCTCTCCCTGGTCTTATTGACATCAATGAAGCTCTGCGCATCTGGAAGCTCGACAAGCTTGACTTTCTTGCCTGTCTTGGCGCTTTCCTCGGTGTCTTGTTTCATTCCGTGGAATTTGGCCTTCTTCTTGCGGTCGGAATTTCATTTGCAAAGATATTGTTGATATCGATGAGACCCGCTATAGAAGAGGTGGGAAGGCTCGGAAGAAGTGACATGTTTGGCAACATGAAGCAATTCCCTATGGCCATGAAAACTCAAGGAATCTCCATTGTTAGAATAAACTCTAGCTTGCTTTGTTTTGCCAATGCCAGCTTCATCAAAGACAGAATAATGAGATTGGTTGAAGAAGATGATGATATTGAAGAAACAACCAAAGATCAACCTAAACAACTAGTTGTCGACATGTGTAATGTTATGAATATCGACACGTCGGGGATCATTGTTCTAGAGGAACTTCACAAGAGGTTGTTATTGAACGGGATACAGGTAACAATAGCAAGTCCAAAATGGGAAGTGATTCACAAACTTAAAAGAACCAATTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTGGGTGAAGCTGTGGATTCATGCCTTCAAAATGCTTCCAAATTGCCTTCTTCTACCAAAGTGCTTGTCACTTGA 927 42.07 MAVGRSFASIKGYNIDGNREMIAMGFMNIIGSLTSCYVATGSFSRTAVNFSAGCESVLSNIVMAITVMLALKFFTRLLYFTPMAILASIILSALPGLIDINEALRIWKLDKLDFLACLGAFLGVLFHSVEFGLLLAVGISFAKILLISMRPAIEEVGRLGRSDMFGNMKQFPMAMKTQGISIVRINSSLLCFANASFIKDRIMRLVEEDDDIEETTKDQPKQLVVDMCNVMNIDTSGIIVLEELHKRLLLNGIQVTIASPKWEVIHKLKRTNFVERIEGRVFLSVGEAVDSCLQNASKLPSSTKVLVT 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18102058 18107536 - Carg18248-RA Car04g02235 147660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02235 308 ProSiteProfiles STAS domain profile. 190 292 IPR002645 -
Car04g02235 308 Pfam Sulfate permease family 2 118 IPR011547 GO:0016021
Car04g02235 308 Pfam STAS domain 174 288 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02235 Car-Chr4:18102058 Car06g01192 Car-Chr6:8732347 7.32E-89 dispersed
Car15g00671 Car-Chr15:3743521 Car04g02235 Car-Chr4:18102058 1.47E-90 wgd
Car04g01189 Car-Chr4:6832847 Car04g02235 Car-Chr4:18102058 7.97E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02235 K17469 - csv:101211892 512.301