Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02247 ATGCATCGTCTGCCTCAGTTTTTCTCTCCTGGGAAACGAAAAAAAGCTATGGATTCGAGAAAAAACGCAGGTAAACCCAAGCTTGGCCGACTTAATGCGGCGAAGAACATCGATTATGACGCTCCTTCCTCGTCTTCTTCGCTCGAAGATTCTTCTGGATCTCTTTACACTCGGTCCATGGACACGCCGGATGGCTCCAGCTTTCGGATTAATGGGATCGACGGTGAAATTGATTTCATCTGTCGGACTTTAGGGCTAAACGGTCCTGAAGACTTTGGGATTCCGATGGAGGCTTGGGAGGCCAGAAAGCTTCGTTCATCTTCCGAGCTTCTACCGAAGTCGAGATTGCATACTATTGATAGCCCGAAAAGCGAGGAAGTTAGTATGGAGAAGGAAGATAAAGAAATCGAAGATGAATTGTGCCTTAGGGTTAAGGATTCAGTTCGAATTAGCGTTGAGCAATCGACGGCTAAGACCGAATCTCTCGAGTGGAATGAAAGCCGTATGGCTACTACTGTTGAATGTAGCCCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCGCCGCCGCCTATGGATGTCGATAATACTTGGGACATTTTGAAAACCTTTGCTCCTTTAGTTGACGAAGAAAATCGCGATGAAGTTCAAAAAGGAATCGAACCTTTTGTCGAAGGAGAAGGAGAGGGAAATATTGTCGGGCCTGTGGAGAATTCACCGCTCGTTCGGTCTTGGTGTTCTTTCACAACCTCGAATGATGATGACTGTTCGAGCTGCACTACAGAGCCTGCAAATATTTCACCCAATATGAGATGCAAACCCATCATCACGACTTGGATTAAAGGAAAACGTCTAGGGAGCGGTTCATTTGGATCTGTGTATGAAGCAATGTCACAGAGTGGGGCCTTCTTTGCAGTCAAGGAAGTATCACTGCTCGATGAAGATAGTCAGGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTCGAGCACGAGAACATAGTTCAGTACTATGGCACCGACACGGAGCCGGATGGGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAGGGCTCCCTTATGAGCCTATATCAGAGGGTTGTCCTTACGGATTCCATTGTTTCTGCCTATACAAGGCAGATTCTGTGTGGTTTAAAGTATCTTCATGAGCAAAATGTGGTTCATAGGGATATTAAATGTGCTAATATATTGGTGGATGTGAGTGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGACGTTAAATCTTGTAAGGGAACTCCGTTCTGGATGGCACCTGAGGTGGTTAATAGGAAGGGCCAGGGCTACGGTCTTCCAGCTGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACCCAGAAGCTTCCATACTCGGAATTCGAAAATCATATGCAGGCCCTATATCAGATTGGAAAAGGCAAACTACCGGCGATTCCCGACTCTCTCTCAGACGATGGGCGGGATTTCATTCTGCAGTGCCTTAAAGTTAATCCAAACGATCGTCTTACTGCAGCTGATCTTTTAAATCACCCGTTTGTTAAAAGACCAGCTTCCAGTTCATCAGGGTCAGCATCTCCTTACTACAGGCCAGGCAGAAGAATTTGA 1680 45.89 MHRLPQFFSPGKRKKAMDSRKNAGKPKLGRLNAAKNIDYDAPSSSSSLEDSSGSLYTRSMDTPDGSSFRINGIDGEIDFICRTLGLNGPEDFGIPMEAWEARKLRSSSELLPKSRLHTIDSPKSEEVSMEKEDKEIEDELCLRVKDSVRISVEQSTAKTESLEWNESRMATTVECSPRSGINGARPPLLKPPPPMDVDNTWDILKTFAPLVDEENRDEVQKGIEPFVEGEGEGNIVGPVENSPLVRSWCSFTTSNDDDCSSCTTEPANISPNMRCKPIITTWIKGKRLGSGSFGSVYEAMSQSGAFFAVKEVSLLDEDSQGRQSIYQLQQEIALLSEFEHENIVQYYGTDTEPDGSKLYIFLELVSQGSLMSLYQRVVLTDSIVSAYTRQILCGLKYLHEQNVVHRDIKCANILVDVSGSVKLADFGLAKATKLNDVKSCKGTPFWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTQKLPYSEFENHMQALYQIGKGKLPAIPDSLSDDGRDFILQCLKVNPNDRLTAADLLNHPFVKRPASSSSGSASPYYRPGRRI 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18194981 18199361 + Carg18236-RA Car04g02247 147672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02247 559 MobiDBLite consensus disorder prediction 1 67 - -
Car04g02247 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Car04g02247 559 MobiDBLite consensus disorder prediction 168 194 - -
Car04g02247 559 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Car04g02247 559 MobiDBLite consensus disorder prediction 38 66 - -
Car04g02247 559 ProSiteProfiles Protein kinase domain profile. 282 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02247 559 Pfam Protein kinase domain 284 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02247 559 MobiDBLite consensus disorder prediction 540 559 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02247 Car15g00659 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02247 Car-Chr4:18194981 Car02g00816 Car-Chr2:5902584 5.52E-82 dispersed
Car04g02260 Car-Chr4:18250911 Car04g02247 Car-Chr4:18194981 6.12E-23 dispersed
Car15g00659 Car-Chr15:3664044 Car04g02247 Car-Chr4:18194981 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88842 PF00069 Pkinase 5.00E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02247 K13414 - csv:101218538 863.218