Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02261 ATGGCATCTGCCATGGCTAAACCCAAAACACAGAGAAAGCTTACCAGACAGAGCCATGAAAACCAGAAACCAAAGGCGCAGAAGGCAGAGAAGCCGCCGTCTTGGGCAGTTGTTAGAGGCATATTCAGCTGTAAGTACCTGCAGCCTCAACAACAACAACAGAATCAATTGCCACGCAAAGAGAAACAAACGGAGCAAGCAACAGAAGAGAGTAGCAAGAACTGTAAGAAAATGAGGTGTTCGGGTTCACTGTGTAGCAACACTAAGGTAACATACAGGCTTGAAGTAGCAGCATCACCGGATGCTCACAAGAAAAGGGCATTGGCTTCTTCAATGGGTTCTAAAAACAATGAGTCCTTAAGTTCAAGTAGATCCACAAAAGCTCCTCCTTTGAACGAACAAAATGGTGTTCTATCAGCCACAACTTCATCGTTATCTGCATCATCTTCTTCCAATTCCTCCAATGGTGCCTCTTTCAGGGGAATGCCTTTCAGGAGATTCTATGGCTGTTATGAATGTAAAATGGTGATTGACCCTGTTCTTGGGATGACTAGAGATCCTTCTCTTAGAGCAACTATTTTCCCTTGTCCTGAATGTGGGGAGATTTTCATGAAAGCTCAAGCTTTAGAGCTTCACCAGAGTGTTAGACATGCAGTATCTGAACTTGGTCCTGAAGACACAAGCAAGAACATAGTGGAAATCATATTCCAGTCGAGCTGGCTAAAAAAGCAAGCCCCAGTTTGCAAAATTGAAAGGATTCTCAAAGTCCAGAACACTGCAAAGACCATCTCGAAATTCGAGGAATACAGGGATTCCATTAAAGCCAAAGCCATAAAGCTTTCAAAGAAGCATCCACGATGCATAGCAGATGGCAACGAACTCTTAAGGTTCCACTGCACCACCTTGGCCTGCTCATTGGGTCTAAATGGCTCCTCCAACCTCTGCAGTTCAATACCACATTGCAATGTCTGTAGCATAATCAAGAATGGGTTCAAGGTGGCGGCAGAGGCCACTGGAGGGGACGCTGGAAAGGGGATTCTAACAACAGCAACAAGTGGAAAGGCTCATGACAGTGCCGGAATATCATCGGACGGCAATGACAAAAGGGCAATGCTGGTTTGCCGAGTAATAGCTGGTAGGGTGAAGAAAAGTTCAGAAGGCACTATGGAGGATTATGACTCATTGGCCGGAGCAGCAGGCATGTATTCCAATTTGGATGAGTTATACGTGTTCAGTCCCAAGGCAATATTGCCCTGTTTTGTTGTCATTTATGGAGGGTTTTAA 1284 45.02 MASAMAKPKTQRKLTRQSHENQKPKAQKAEKPPSWAVVRGIFSCKYLQPQQQQQNQLPRKEKQTEQATEESSKNCKKMRCSGSLCSNTKVTYRLEVAASPDAHKKRALASSMGSKNNESLSSSRSTKAPPLNEQNGVLSATTSSLSASSSSNSSNGASFRGMPFRRFYGCYECKMVIDPVLGMTRDPSLRATIFPCPECGEIFMKAQALELHQSVRHAVSELGPEDTSKNIVEIIFQSSWLKKQAPVCKIERILKVQNTAKTISKFEEYRDSIKAKAIKLSKKHPRCIADGNELLRFHCTTLACSLGLNGSSNLCSSIPHCNVCSIIKNGFKVAAEATGGDAGKGILTTATSGKAHDSAGISSDGNDKRAMLVCRVIAGRVKKSSEGTMEDYDSLAGAAGMYSNLDELYVFSPKAILPCFVVIYGGF 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18260093 18261945 + Carg18222-RA Car04g02261 147686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02261 427 MobiDBLite consensus disorder prediction 110 157 - -
Car04g02261 427 MobiDBLite consensus disorder prediction 13 27 - -
Car04g02261 427 MobiDBLite consensus disorder prediction 101 157 - -
Car04g02261 427 Coils Coil 50 70 - -
Car04g02261 427 MobiDBLite consensus disorder prediction 48 73 - -
Car04g02261 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 194 222 IPR013087 -
Car04g02261 427 MobiDBLite consensus disorder prediction 1 34 - -
Car04g02261 427 ProSitePatterns Zinc finger C2H2 type domain signature. 196 217 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02261 Car15g00647 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01540 Car-Chr1:12929108 Car04g02261 Car-Chr4:18260093 6.09E-97 dispersed
Car02g00544 Car-Chr2:4240971 Car04g02261 Car-Chr4:18260093 1.51E-65 dispersed
Car02g01311 Car-Chr2:8724258 Car04g02261 Car-Chr4:18260093 1.23E-34 dispersed
Car04g02261 Car-Chr4:18260093 Car09g00098 Car-Chr9:476995 1.29E-108 dispersed
Car15g01038 Car-Chr15:8171726 Car04g02261 Car-Chr4:18260093 8.52E-34 dispersed
Car15g00647 Car-Chr15:3571696 Car04g02261 Car-Chr4:18260093 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3442 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02261 - - bhj:120067077 714.531