Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02296 ATGGAATTGAAAGCAGCAGATGTAGCGGAAGTTCAACAAATACAGCAACATTTCCATGTGTTGGCTGTCGATGATAACCTTATAGACAGAAAACTTTTGGAAAAGCTCCTAAGAATTTCTTCATGCGAAGTGACCTGCGTGGAGTCTGGAGACAAAGCTCTTAGATACCTGGGTCTGCTTGATGACCTTGACAAATTTTCTTCCTCTGCTGCTTCATTTTCTTCCCCACAACTCTCCCACCAACAGGAAGTCAAAGTCAACTTAATCATGACAGACTACTGTATGCCTGGGATGACTGGTTATGATCTACTCAAACGACTCAAGGGATCTTCTTGGAAAGATATTCCTGTTGTTGTCATGTCATCGGAGAATGAACCTTCAAGAATCCACATGTGCTTGGAAGAAGGAGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTATCAGACGTGAAGAAGCTCGAGCCTCACCTTCAGAGGTCCCTCAGCCGTTCATCTAATGAAATAAAAGAAGAAGAAACCGTCGAAATCGGAATCACTAATTCCGACGCCATTGACGACGAAAACAGCACGAAAGAAGAAAATAACAAAAACGACAATAACAATACCTTCAGCAAGAGAAAAGCCGCGAATCCAGAGCCATCTGAAAGACGACCAAAACTGAAAGAACTGCAAGCTGCAGTATAA 684 42.69 MELKAADVAEVQQIQQHFHVLAVDDNLIDRKLLEKLLRISSCEVTCVESGDKALRYLGLLDDLDKFSSSAASFSSPQLSHQQEVKVNLIMTDYCMPGMTGYDLLKRLKGSSWKDIPVVVMSSENEPSRIHMCLEEGAEEFLLKPLQLSDVKKLEPHLQRSLSRSSNEIKEEETVEIGITNSDAIDDENSTKEENNKNDNNNTFSKRKAANPEPSERRPKLKELQAAV 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18440015 18442403 + Carg24432-RA Car04g02296 147721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02296 227 MobiDBLite consensus disorder prediction 185 200 - -
Car04g02296 227 Pfam Response regulator receiver domain 20 151 IPR001789 GO:0000160
Car04g02296 227 MobiDBLite consensus disorder prediction 153 176 - -
Car04g02296 227 ProSiteProfiles Response regulatory domain profile. 19 158 IPR001789 GO:0000160
Car04g02296 227 MobiDBLite consensus disorder prediction 209 227 - -
Car04g02296 227 MobiDBLite consensus disorder prediction 153 227 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02296 Car15g00618 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02296 Car-Chr4:18440015 Car14g00475 Car-Chr14:2529750 5.45E-58 dispersed
Car15g00618 Car-Chr15:3430886 Car04g02296 Car-Chr4:18440015 7.99E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3445 PF00072 Response_reg 5.50E-18 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02296 K14492 - csv:101216267 282.722