Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02304 ATGGCAAGTAGTCAACAGAAGGAAGCACAGATGAGTACGGTGGCGACACCGTCCTTTGGCGGCGGCAGCAATCGCATAGCGGCGGTGAACACGGCGGAGACAACTACGATTCCGGCCGACGCCGTGAAAACACAAAATCACCGAGAAGAACCAACCACCACCGATCAGAAACCTGGATGGAGAAAGTTTCTTTCACACGTTGGCCCTGGTTTCCTCGTGTCATTGGCTTACCTTGATCCTGGCAACTTGGAAACCGACTTGCAGGCTGGAGCAAATCACGGATTCGAGCTTTTGTGGGTGGTGCTTATCGGATTAATATTTGCGCTCATAATTCAATCCCTGGCTGCAAATCTTGGCGTAAGCACAGTGATAGGAACGGCCTTTGCCCTGAATATTCTATTCCATATTCCGGTTTGGGCTGGAGTTCTTCTCACCGGTTTAAGCACCCTCTTGCTCATAGGGCTCCAGAGATACGGGGTGAGGAAGCTGGAATTGCTGATAGCGATTTTGGTGTTTGTAATGGCGGCGTGTTTCTTCGGGGAAATGAGCTACGTTAAGCCGCCGGCGACCGGAGTTTTGAAAGGAATGTTTGTGCCGAAACTGAACGGGCAGGGTGCCACCGGCGACGCCATTGCTCTCCTCGGCGCTCTGGTTATGCCGCACAATCTGTTTCTTCATTCGGCTCTCGTGCTGTCAAGGAAAGTGCCAAATTCTGTCCGTGGTATCAACGACGCGTGCCGGTATTTCCTAATAGAGAGCGGTTTCGCATTGTTCATATCCTTTTTAATAAACATGGCCGTCGTTTCAGTTTCTGGCACCGTCTGTACGGTCGGCCATGTCTCTGAATCCACCGCCGATCAGTGCTCCGACATCACCCTCAACTCCGCCTCCTTCCTCCTCCAGAATGTGTTGGGAAAATCGAGCTCCACTATTTACGCCATAGCCTTGCTTGCCTCCGGACAAAGCTCCAGCATCACCGGCACTTACGCCGGACAGTTCATCATGCAGGGATTTTTGGACCTGAAAATGAAAACATGGATGAGGAACCTTATGACCAGATCCATTGCCATTACGCCCAGTCTCATTGTCGCCATTATCGGTGGACCTCAAGGAGCTGGACGTCTCATCATTATCGCATCGATGATCCTTTCCTTCGAGCTTCCATTCGCTCTAATTCCGCTTCTCAAATTCAGTAGCAGCACCACCAAGATGGGCCCCCACAAGAATTCCATATACATCATTGTAATCTCATGGATATTGGGCCTATCAATCATCGGCATCAATATCTATTATCTCAGTACGGGCTTCGTGGGCTGGCTTATCGACAACAATTTACCCAAAGTTGCTAATGTATTCATTGGGATCGTTGTATTTCCTTTGATGGCCGTTTATATTCTTGCTGTTATTTACTTAACGTTCCGAAAGGATAGGGTTGTGACTTACATTGAGCCCCAAAAGCCCGACCCGATGGCCCAAGCCCATTTGGAAAGTGGGCTGCATAATTCTTTTGGGCCTGGTGACGTCGCCCCGGTTCCTTTTAGAGACGATTTGGCCCATATTCCACTTCCAGAGTAA 1575 49.78 MASSQQKEAQMSTVATPSFGGGSNRIAAVNTAETTTIPADAVKTQNHREEPTTTDQKPGWRKFLSHVGPGFLVSLAYLDPGNLETDLQAGANHGFELLWVVLIGLIFALIIQSLAANLGVSTVIGTAFALNILFHIPVWAGVLLTGLSTLLLIGLQRYGVRKLELLIAILVFVMAACFFGEMSYVKPPATGVLKGMFVPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALFISFLINMAVVSVSGTVCTVGHVSESTADQCSDITLNSASFLLQNVLGKSSSTIYAIALLASGQSSSITGTYAGQFIMQGFLDLKMKTWMRNLMTRSIAITPSLIVAIIGGPQGAGRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLSIIGINIYYLSTGFVGWLIDNNLPKVANVFIGIVVFPLMAVYILAVIYLTFRKDRVVTYIEPQKPDPMAQAHLESGLHNSFGPGDVAPVPFRDDLAHIPLPE 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18560778 18564564 - Carg15738-RA Car04g02304 147729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02304 524 Hamap Divalent metal cation transporter MntH [mntH]. 52 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car04g02304 524 Pfam Natural resistance-associated macrophage protein 121 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car04g02304 524 MobiDBLite consensus disorder prediction 1 42 - -
Car04g02304 524 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02304 Car-Chr4:18560778 Car14g00955 Car-Chr14:5785491 9.57E-176 dispersed
Car04g02304 Car-Chr4:18560778 Car01g00160 Car-Chr1:809697 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02304 K21398 - csv:101219356 863.218