Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02306 ATGGATCGACAACGGTTACAGCTGCTTGGTGTTGCTTGCATGATGATTGCTTCAAAATATGAAGAGATCTGTGCACCTCAAGTGGAAGAGTTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCATCTGTCTTGAATTACTTGAAATTTGAAATGACAGCTCCAACACCCAAATGTTTTTTAAGACGATTTGTTCGTGTTGCTCGAGGCGTCGATGAGGTTTCATCGATGCAGTTGGAGTGCTTGTCGAACTTCATTGCCGAATTGTCTCTTTTAGAATACAATATGCTCTGCTACGCCCCGTCGCTCATAGCTGCCTCGGCGGTTTTCTTGGCGAAGTTCATTCTTCTCCCGACTAAGAGACCATGGGTATGGAACCATCCTCTATCTCCTCTAGTATTTCTTTGA 429 42.42 MDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTPKCFLRRFVRVARGVDEVSSMQLECLSNFIAELSLLEYNMLCYAPSLIAASAVFLAKFILLPTKRPWVWNHPLSPLVFL 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18576798 18578492 + Carg15740-RA Car04g02306 147731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02306 142 Pfam Cyclin, N-terminal domain 2 59 IPR006671 -
Car04g02306 142 Pfam Cyclin, C-terminal domain 62 130 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02306 Car-Chr4:18576798 Car17g00774 Car-Chr17:6828462 5.94E-52 dispersed
Car04g02306 Car-Chr4:18576798 Car15g00608 Car-Chr15:3365078 1.74E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02306 K06627 - csv:101221569 244.973