Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02346 ATGGATTATTCGCCGTTCTTCTCTGTTCATTTCTTCTTCTTCTTCATCCTTTCCAGTTTCGCCCCTCTTTCCCTTTCTTTCTTGTCCAGTGAAAACTTTACCCTCTCCGGTGACGCCCATATCAGAAACAATGCCATTCTTCTCACTAAAGAACACAGCTGCCTTCCCTTTTCTTCGAATTCCCGTTCCGGGGTCGGAACCGCCTTCTACGTAAACCCTTTTCGCTTTCTTGATTTCTCCACCAATTCCACGGCTTCTTTCTCCTCTCGATTCTCCTTCTCCATTGTCCCCACCCCTTTTTGCCCTTTAGCCGATGGAATCGCCTTTCTCATCACCTCCGATACCAAATCTTTCAGCCGCTCTCTTGGGCACATGGGCCTTCCCGACCCGTCTCTTGATTCCCACCTTTCTTTCGTCGCTGTTGAATTCGACACCAATTTCCACCCTGATCTTGGTGACATTAATGACAACCATCTCGGTCTTGATCTCAACTCACCTACCTCTTTGACTTCTGTGGATTTTTGGTCAAGTGGCATTGTTTTGAAAAATGGCAGGAAGATTACTGCTTGGATTGAATACAGGGATGACATTAAGATGATCCAGGTCTGGGTTGGGTATTCCCAGACTCGACCCGCAAATCCTCTTCTGGTTGCGCAGATCGACCTTTCTAAGCAATTTAAGGAGTTTATGTATGTGGGATTCTCTGCTTCCAATGGGAAGGGCTCTGCTCTTTACATTGTTGATAGATGGCTATTTAGAACTTTTGGGTTGGTCCCTTCTTTGAGTCCTGTGGGTGCCATTAACGAAGGAGACTGTTTTATGTGCTCGTCGGAGGATTCAAGCACCAATAGCAGTCATGTCGTTGATGCTCGTAAGAGCAAGAACATTGGGGAGATGACCCTTGGATTGGGAGGTTTAGCTGCATTTGTTTGCTGCATTGTTGCAATTGTTGGTTATGTTTTGATAAAGAAGTTTAGAGGTAGAATGTCCAGAGTCAGAGCAGCCCATGTAACCTCTCATGTTCATATGAACAGAGTGCCAATGAGATTGTCTCTTCATGAGATAAAGTTGGCTACAATGGGGTTTAATCAAAACAGAGTTGTTGGGGAAGGTGGTTCTGCAACAGTATACAAAGGGTCTCTCTCATACGGTGGAGAAGTAGCCGTTAAACGATTCGAGCGAAGCACGTCAAACAACCGCCAGTGCATTCCTTTCACCACAGAGTTCGCAACAATGGCGGGCGGCTTAAGACACGAGAATTTGGTTCAACTTCATGGATGGTGCTGTGAGGCGAACGAGTTGATGCTTGTTTACGAGTACTTACCCAACGGAAGCCTCACCGAACTTCTTCACAATAGCTCCTCCAATTCACAATTTGTTCTTCCTTGGAAGAACAGGTTGTCCATAGTTCTTGGGGTTGCTTCTGCATTGACATATCTTCACGAAGAATGTGAGAACCAAATTATTCATAGGGATGTCAAGACGTGCAACATTATGCTCGATGCAGAGTTCAACGCCAAACTAGTGGATTTCGGTCTAGCAGAAGTATACGAACACGGTTCGAAAACAAGAGAAGCAACCATACCAGCCGGAACGATGGGATACCTTGCACCCGAATATGTTTATTCCGGTGTTCCCACTGTCAAATCCGATGTTTACAGCTTCGGTGTGGTAATGCTCGAAGTTGCATCGGGACGGAGGGCTGTAGAAGAAGACGGGACGGTGCTCGTCAGCTGGACTTGGGATCAATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAAGGTTGATGGGAGAGTACAATGTTGTAGAAATGGAAAGAATTCTAATGGTGGGACTTCTCTGTGTGCATCCAAATCATGAAAAGAGGCCAACTGCTAAAGAAGCTGCAAGGATCCTCAAAGGGGAAGCACCACTCCCTCTACTGCCATCAAGGAAACCAAGGGTCAACATCAAGCCTATTTTTTCTTGA 1974 45.95 MDYSPFFSVHFFFFFILSSFAPLSLSFLSSENFTLSGDAHIRNNAILLTKEHSCLPFSSNSRSGVGTAFYVNPFRFLDFSTNSTASFSSRFSFSIVPTPFCPLADGIAFLITSDTKSFSRSLGHMGLPDPSLDSHLSFVAVEFDTNFHPDLGDINDNHLGLDLNSPTSLTSVDFWSSGIVLKNGRKITAWIEYRDDIKMIQVWVGYSQTRPANPLLVAQIDLSKQFKEFMYVGFSASNGKGSALYIVDRWLFRTFGLVPSLSPVGAINEGDCFMCSSEDSSTNSSHVVDARKSKNIGEMTLGLGGLAAFVCCIVAIVGYVLIKKFRGRMSRVRAAHVTSHVHMNRVPMRLSLHEIKLATMGFNQNRVVGEGGSATVYKGSLSYGGEVAVKRFERSTSNNRQCIPFTTEFATMAGGLRHENLVQLHGWCCEANELMLVYEYLPNGSLTELLHNSSSNSQFVLPWKNRLSIVLGVASALTYLHEECENQIIHRDVKTCNIMLDAEFNAKLVDFGLAEVYEHGSKTREATIPAGTMGYLAPEYVYSGVPTVKSDVYSFGVVMLEVASGRRAVEEDGTVLVSWTWDQWEVGKLIEASDSRLMGEYNVVEMERILMVGLLCVHPNHEKRPTAKEAARILKGEAPLPLLPSRKPRVNIKPIFS 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18854041 18856014 - Carg15780-RA Car04g02346 147771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02346 657 Pfam Protein kinase domain 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02346 657 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Car04g02346 657 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Car04g02346 657 ProSiteProfiles Protein kinase domain profile. 362 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02346 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Car04g02346 657 Pfam Legume lectin domain 26 254 IPR001220 GO:0030246
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02346 Car-Chr4:18854041 Car16g00925 Car-Chr16:7586734 2.67E-149 dispersed
Car04g02813 Car-Chr4:21466681 Car04g02346 Car-Chr4:18854041 1.79E-07 dispersed
Car15g00564 Car-Chr15:3132758 Car04g02346 Car-Chr4:18854041 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88846 PF00069 Pkinase 7.30E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02346 - - cmax:111486861 1211.05