Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02353 ATGATGGATTTGAACTTCACCGCCCGGAAACCGCCGCAGACGGCGACGAGGATGGACATAGAACAGATGCCGGAGACTCCACACCGTGGCTATCACCATCGCCGTTCTCACTCCGATACAACTTTCCGCTTTGCTAATTTCGACGATCTTCTCCTCTTCGATCATCCCGACCACGATTTATCATCTTCCCTTCGTTCTCCCTCTCCGTCGCCATCTCCGACGCCGGTGGGCGCTCGTATGGCCCTCGATTCTTTCAATTCAAAGTCCCCTGACGACGCCTCTGCCTCGAAACCTGAAGCTAGTAAGGACACCTCGGCTTCAGACTTCTTTGGTGCTCACTGCCGGAGTTTGTCGATGGATTCAGACTTCTTCGACGGCTTAGGGATAGCCGGAGACGGCAGCGACGGTGAGGTACTTGGCGGGAGGGTAACGGTCGGGGAGAAGAAGATCGGTCGCCATAGACATAGCAATTCCATGGATGGCGCTTTGACCTCGTCGTTTGAAGCGGAATCCACCGGCGTAATTGATTGCTCCAAGAAGGCCATGGCACCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCTAAGAGGATCCTGGCGAACAGACAATCTGCTGCACGATCCAAGGAGAGGAAAATACGTTACACAAACGAATTAGAGAAGAAGGTGCAGATGCTTCAATCAGAAGCGACTTCCCTTTCTGCACAGGTCACTGTATTACAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGCACTGAACGAGACATTGAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGTTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCCAGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAA 990 51.62 MMDLNFTARKPPQTATRMDIEQMPETPHRGYHHRRSHSDTTFRFANFDDLLLFDHPDHDLSSSLRSPSPSPSPTPVGARMALDSFNSKSPDDASASKPEASKDTSASDFFGAHCRSLSMDSDFFDGLGIAGDGSDGEVLGGRVTVGEKKIGRHRHSNSMDGALTSSFEAESTGVIDCSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18925173 18926733 - Carg15787-RA Car04g02353 147778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02353 329 Coils Coil 247 291 - -
Car04g02353 329 MobiDBLite consensus disorder prediction 307 329 - -
Car04g02353 329 MobiDBLite consensus disorder prediction 1 35 - -
Car04g02353 329 MobiDBLite consensus disorder prediction 313 329 - -
Car04g02353 329 MobiDBLite consensus disorder prediction 87 103 - -
Car04g02353 329 Pfam bZIP transcription factor 196 254 IPR004827 GO:0003700|GO:0006355
Car04g02353 329 MobiDBLite consensus disorder prediction 59 106 - -
Car04g02353 329 Coils Coil 219 239 - -
Car04g02353 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 257 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02353 Car-Chr4:18925173 Car06g00794 Car-Chr6:6127469 1.16E-122 dispersed
Car20g00269 Car-Chr20:1559284 Car04g02353 Car-Chr4:18925173 9.12E-21 dispersed
Car04g02353 Car-Chr4:18925173 Car02g00508 Car-Chr2:3978344 1.13E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3450 PF00170 bZIP_1 3.20E-07 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02353 K20557 - csv:101215277 423.705