Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02354 ATGGACCCCAACAAGGTAAACCTAAGCAATTTGGAGCAACAATCCCCCTCCGACATCGAAACCAAGCAATTCGACTACTCCAAACGAGCCCAATGGCTACGTGCAGCTGTGCTCGGTGCCAACGACGGGCTCGTCTCGACCGCGTCTCTCATGATGGGAGTTGGAGCCGTGAAACAAGACATCAAGGCCATGATCCTCACCGGCTTCGCCGGGTTGGTTGCCGGTGCGTGTAGTATGGCGATTGGCGAGTTCGTGTCGGTTTACTCACAATTAGACATTGAAGTAGCTCAAATGAAGAGAGAAAAGTTGCAAAGAGGTAGCCATCTAGATGGGCAAAGCCAAAGCGGCCAAGAGAGCAAAGGTAATGAAAAGCTGCCTAACCCACTCCAAGCCGCTATAGCCTCTGCCTTGGCTTTCTCTATTGGAGCAATGGTGCCATTGTTGGCTGCCTCCTTTATAAGAGAATATAAGGTAAGGCTCGGCGTGGTTGTCGCAGCGGTAACGTTGGCTCTCCTCGCGTTCGGGTCGTTGGGCGCCGTCCTTGGAAAAGCATCACCGGTTAAGTCGTCCATCCGAGTGTTGGTTGGAGGTTGGCTAGCCATGGCTATAACCTTCGGATTAACAAAGCTAATCGGAGTAAGTGGACTCTAG 651 52.07 MDPNKVNLSNLEQQSPSDIETKQFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKLQRGSHLDGQSQSGQESKGNEKLPNPLQAAIASALAFSIGAMVPLLAASFIREYKVRLGVVVAAVTLALLAFGSLGAVLGKASPVKSSIRVLVGGWLAMAITFGLTKLIGVSGL 216
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 18932856 18933506 + Carg15788-RA Car04g02354 147779
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car04g02354 216 Pfam VIT family 33 105 IPR008217 GO:0005384|GO:0030026
Car04g02354 216 Pfam VIT family 120 208 IPR008217 GO:0005384|GO:0030026
Car04g02354 216 MobiDBLite consensus disorder prediction 104 125 - -
Car04g02354 216 MobiDBLite consensus disorder prediction 108 124 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02072 Car-Chr4:16857531 Car04g02354 Car-Chr4:18932856 5.67E-07 dispersed
Car04g02354 Car-Chr4:18932856 Car15g00839 Car-Chr15:4831510 4.80E-06 dispersed
Car09g00979 Car-Chr9:6229726 Car04g02354 Car-Chr4:18932856 7.72E-103 transposed
Car19g00252 Car-Chr19:2782198 Car04g02354 Car-Chr4:18932856 1.81E-89 transposed
Car15g00555 Car-Chr15:3060715 Car04g02354 Car-Chr4:18932856 2.96E-119 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02354 K22736 - csv:101204048 341.273