Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02399 ATGGATTTCGGAAGTGAGGTTATTCCAATGATGAACACCATGGGAATCTTTGAAGATATTGGCTTTTGCCAAAATCTTGAATATTTTTCGGCTCCTTCTGGGGAGCAAGAGATGGGTCGGGAGCATGAAGGAGAGGCTACTTTGGAGGAAGATTATAGCGATGAAGAGCTGGATGTTGACGAGCTTGAGAGAAGGATGTGGCGTGATCGGATGCTTTTGAGGCGACTCAAAGAACAAAGCAAAGAGAAGGAAGGGGATGATAATTCAAAGCAGCGTCAATCCCAGGAGCAAGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGACGGTATCCTGAAATATATGTTGAAAATGATGGAGGTTTGTAAAGCTCAAGGTTTCGTTTATGGGATCATTCCTGAGAAAGGAAAGCCAGTGAGTGGAGCTTCTGATAATCTTCGTGCCTGGTGGAAAGAACGAGTCAGATTCGATAGAAATGGCCCAGCAGCCATTACCAAATATCAGGCTGATCATGCAATTCCTGGGATCAATGATGACTGCAATACAGTGACATCCACCCCCCACACTTTACAAGAGCTCCAAGATACAACCCTTGGATCACTTTTGTCTGCTCTGATGCAGCACTGTGATCCACCCCAGCGTCGTTTTCCATTAGAGAAGGGAGTTTCCCCACCGTGGTGGCCTACTGGAAACGAGGAATGGTGGCCTGAATTGGGATTACCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGTTTGGAAAGTTAGCGTTCTCACTGCTGTGATTAAGCACATGTCGCCCGACATTGCCAAGATTCGCAAGCTTGTTCGTCAGTCTAAATGTTTGCAAGACAAGATGACTGCAAAAGAGAGTGCTACATGGCTGGCCATTGTAAACCAGGAAGAAGCCTTGGCCAGGAAATTGTATCCTGATAGATGCCCACCTGTGTCGATCTGTGGGAGCGGATCTCTTTTAATCAGTGACAGTAGCGATTACAATGTTGAAGTAGTGAAAGACGAACCAAATGTCGAAACAGAGGAAAGGAAGCCTCATGATCTCAATTTCTTTAATATGGGGACTCCTGGACCTAGAGAGAGGCCAATGATGCCACCATTGGGACCTCAGATAAAGGAAGAACTCATGGAGAACAGTTCAAACTTTATTCAAAAGAGGACTCTGATTACTGATGAGTCAAATACAATGATGCCTCAGAAGATATATACTTGTGAATATTCTCAATGCCCATATAACAGCTCGCGCCTCGGGTTTCTCGACAGGACTTCGAGAAACAACCACCAGTTGAACTGCCCATTTAGGAGTGATTCTTCCCCAATATTTGGCATCCCAAACTTTCTAACTAACGATGATAAATCATCTCCAGTTCTTCCCTCCTTTAACCATTCCAAGCCTCCTACCCGGCCTATGAACCCAACTCCACCACTCAGAGTATCAGGCCTTGGACTTCCAGACGACGACCAGAAAATGATCACTGACCTTCTAAGTTTCTACGATTCTAACCATCAACAGGACAAGATTTTGAATTCCGGGAACGTCGAAGCAAGAGCCGACCACAACCAACAGCTGCCAAAATTCCAACTCCAAGTTGATGATAACTTGTATTGCCAAGGAGCAATGGTGGGGGGAAGTAGCATGCCAATGCAGCTCCCTGATTTCTCTTCCACAAAAGTCCCATTTGACGAATACAAGACGTTCGATTCTCCTTTCGGCATGTATCCTAACGATAACATTCCCGACTTCAGATTTGGTTCTCCCTTTAACTTGGCATCAATCGATTACCCAGTAGACCCACCGTTGCCAAAGCAAGATACACAATTGTGGTACCTTTGA 1863 45.73 MDFGSEVIPMMNTMGIFEDIGFCQNLEYFSAPSGEQEMGREHEGEATLEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKEGDDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKERVRFDRNGPAAITKYQADHAIPGINDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKVWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDRCPPVSICGSGSLLISDSSDYNVEVVKDEPNVETEERKPHDLNFFNMGTPGPRERPMMPPLGPQIKEELMENSSNFIQKRTLITDESNTMMPQKIYTCEYSQCPYNSSRLGFLDRTSRNNHQLNCPFRSDSSPIFGIPNFLTNDDKSSPVLPSFNHSKPPTRPMNPTPPLRVSGLGLPDDDQKMITDLLSFYDSNHQQDKILNSGNVEARADHNQQLPKFQLQVDDNLYCQGAMVGGSSMPMQLPDFSSTKVPFDEYKTFDSPFGMYPNDNIPDFRFGSPFNLASIDYPVDPPLPKQDTQLWYL 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19172289 19175564 - Carg15834-RA Car04g02399 147824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02399 620 Pfam Ethylene insensitive 3 60 307 IPR006957 GO:0005634
Car04g02399 620 MobiDBLite consensus disorder prediction 78 104 - -
Car04g02399 620 MobiDBLite consensus disorder prediction 33 55 - -
Car04g02399 620 Coils Coil 45 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02399 Car-Chr4:19172289 Car10g00877 Car-Chr10:5251306 0 dispersed
Car15g00509 Car-Chr15:2772226 Car04g02399 Car-Chr4:19172289 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3456 PF04873 EIN3 7.50E-131 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02399 K14514 - csv:101214396 1030.01