Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02405 ATGGCGTCGGATTGGCCGCTCTTGATTGTATCTCCAAGAACACCGAAAACTACATCTCACGATCTACAAAAACAGGATCCGAACCAACCTGGATTGTTCTTCGCTATGAATGAGAACTTAGCGAGTACTGAACTAGGTCACCGCGCTTTCTCGCGGCGAAGTCAATCGTCGCTACAATCGAAATCCTCAATTCGCGAAGTGAGTTCTAGTGATGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCCGATTCTGAAGCACTGAGCTTATCACAGAAGGAGATCAATGACGAAGATGCGAGGTTGATTTACATCGATGATCCTGAGAAGACAAACGAGAAGTTCGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTAACTTTTCTACCGAGAAATCTGTTTGAACAGTTTCATAGAATTGCTTATATATATTTCCTAGCCATTGCTGTTCTTAATCAACTTCCTCAGCTTGCCGTTTTTGGTCGAACAGTATCTATTTTGCCTTTAGCTTTTGTGCTTCTTGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAGATTGAGAACAATAGATTAGCTTCAGTTTTGGTTGATGGTCAGTTTCATGACAAGAAATGGAAGGATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGGTACCATTCCTTGTGATATGGTGCTTCTTTCTACTAGTGATTCCACAGGGGTTGCTTATGTGCAGACCTTGAATTTGGACGGCGAATCGAATTTGAAAACGAGGTATGCGAAACAGGAGACGATGTCGAAAATGCCTGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGAAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGACTTTCGCTTGGACCTCCAAACATTGTTCTTCGAGGCTGTGAGCTCAAGAACACGAGCTGGGCGGTTGGCGTTGCTGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAATAGTTCTGGAGCTCCGTCGAAAAGAAGTCGACTCGAGACTCGTATGAATGTGGAGATTATTATGCTCTCTTTCTTTCTCATTGCTTTGTGTATAGTTGTTTGTGTTCTTGCTGCTGTTTGGTTCTTTAGAAACAGGGAAGATTTGGATGTTTTGCCTTATTTCAGGAATAAGGATTTCTCAAAAGATCCACCTGAAACCTATAACTATTATGGATGGGGATTGGAGGCCTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCTATTTCACTTTACATTTCGATGGAGCTGGTTCGTGTTGGCCAGGCTTATTTCATGATTCGAGACGTTCAAATGTACGATGAAACATCGAATTCTAGATTTCAGTGTCGAGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTTTTTTCAGACAAAACGGGTACTCTTACTGAGAATAAGATGGAGTTTCGATGTGCTAGCATCTCAGGGGTCGATTATGCAGGTGAAAGTTCCGGCCCCCTCGACGAGCAGATTGGATACTCGGCTCGAGTGAATGGAAAGGTTTTGAGACCGAAAATGGCTGTCAAAACCGACCCCGAGCTTCTACAGTTATCGAAAAGTGGAAAGCACACAAAGAATGGAAGATATATTCATGATTTCTTCCTGGCATTAGCTGCTTGCAATACCATTGTTCCTCTCATTATAGAAACTTCTGATCCTTCAGTGCAATTAGTTGACTACCAAGGTGAGTCCCCGGATGAACAGGCGTTGGTTTATGCTGCTGCGGCATACGGTTTTATGCTGATCGAACGAACCTCTGGTCATATAGTTATCGACATACACGGTACAAAAGAAAGATATAATGTTTTGGGAATGCACGAGTTCGATAGCGACAGGAAGCGGATGTCGGTGATATTGGGATGTCCCGACATGTCCTTCAAAGTATTTGTAAAAGGTGCTGATAACTCCATGTTCAAGGCGATGGGTGGAAATACGAACACGAGTATCATTCAAGCCACTAAAGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACATTAGTTATTGGGATGAAAGAACTCAGCTCTTCTGACTTTGATAAATGGCACTTGATGTTCGAGGAAGCAAGCACTGCACTGATCGGCAGAGCAGCTAAGCTTCGCAAGGTTTCGAGTAGCATAGAAAACAATTTATCCATATTGGGGGCCTCTGGCATTGAAGATAAGTTACAAAAAGGTGTTCCAGAAGCTATAGAAGCTTTAAGAATGGCAGGCATTAAAGTATGGGTTTTGACTGGGGATAAGCAAGAAACAGCCATATCAATAGGTTACTCCTCCAAGCTCTTGACAAACAAGATGACCCAAATTATCATTAACAGCAACTCGGTTGATTCATGCCAAAGGAGTTTAGAAGATGCAATAATTATGTCGAAAAAGCTTGCTACTGCGTCGGGGGTTACACTGGATAGCGAAGGACGTAGTGAAGCTATAACGGCTTCGGTTGCGTTGATCATTGATGGTAGCAGCCTTGTTCATATTCTTGACAGTAGACTTGAAGAACAGCTTTTCCAACTATCTTGTCACTGTTCGGTGGTGTTATGCTGTCGTGTTGCTCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGAGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCAAATGACGTGTCGATGATCCAAAAGGCGGATGTGGGTGTCGGTATCAGCGGTCTAGAGGGTCGACAAGCTGTCATGGCGTCGGATTTCGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGAATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTGCTTGTTCTCTTTTGGTACGTACTCTTCACCGGTTACTCGTTATCGACCGCTATCAACCAATGGAGCAGTGTACTCTACTCTATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAATTCTTGACAAAGACTTAGGAAGAAGGACCCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAAGAGAGCTACAACTCTGGCTTGTTTTGGTTAACAATGGTTGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTTCCTTCTGGGCTACCACCGTCGACATTTCAGGCCTCGGAGATCTCTGGCTACTCGCTACGGTCATCGTCGTCAACTTACACTTGGCAATGGATGTGTTTCGATGGTATTCCATCACCCATGCCGTGATTTGGGGATCCACTCTCGCAACAGTCATTTGCGTAATCGTTCTTGATTCGATATTGTCGCTTCCTGGTTACTGGGCGATATATCACGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTATCGATCGTGGTTGTAGCGTTACTTCCTCGGTTCGTCGTAAAGTACCTTTATCAATATTATAGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAATTTGGAAGGATAAGAGAGATGGGAGTTGTACAAACAGAGATGATCCCAGTCCTCAACAATCCTTCACAACTATGA 3633 43.1 MASDWPLLIVSPRTPKTTSHDLQKQDPNQPGLFFAMNENLASTELGHRAFSRRSQSSLQSKSSIREVSSSDDFGSRPVRHGSRGADSEALSLSQKEINDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLAIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFHDKKWKDIRVGEIIKIGANGTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIIMLSFFLIALCIVVCVLAAVWFFRNREDLDVLPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDVQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASISGVDYAGESSGPLDEQIGYSARVNGKVLRPKMAVKTDPELLQLSKSGKHTKNGRYIHDFFLALAACNTIVPLIIETSDPSVQLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGTKERYNVLGMHEFDSDRKRMSVILGCPDMSFKVFVKGADNSMFKAMGGNTNTSIIQATKAHLHSYSSKGLRTLVIGMKELSSSDFDKWHLMFEEASTALIGRAAKLRKVSSSIENNLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSVDSCQRSLEDAIIMSKKLATASGVTLDSEGRSEAITASVALIIDGSSLVHILDSRLEEQLFQLSCHCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLSTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSGLFWLTMVDTVWQSIAIFFIPLLSFWATTVDISGLGDLWLLATVIVVNLHLAMDVFRWYSITHAVIWGSTLATVICVIVLDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFVVKYLYQYYSPCDIQIAREADKFGRIREMGVVQTEMIPVLNNPSQL 1210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19216962 19222244 + Carg15840-RA Car04g02405 147830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02405 1210 Pfam Cation transport ATPase (P-type) 597 673 - -
Car04g02405 1210 MobiDBLite consensus disorder prediction 51 92 - -
Car04g02405 1210 MobiDBLite consensus disorder prediction 1 31 - -
Car04g02405 1210 MobiDBLite consensus disorder prediction 51 70 - -
Car04g02405 1210 Pfam Phospholipid-translocating ATPase N-terminal 105 171 IPR032631 -
Car04g02405 1210 Pfam Phospholipid-translocating P-type ATPase C-terminal 936 1175 IPR032630 -
Car04g02405 1210 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Car04g02405 1210 Pfam E1-E2 ATPase 205 447 - -
Car04g02405 1210 MobiDBLite consensus disorder prediction 12 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02405 Car-Chr4:19216962 Car07g01175 Car-Chr7:7105232 0 dispersed
Car15g00499 Car-Chr15:2721592 Car04g02405 Car-Chr4:19216962 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02405 K14802 - csv:101212953 2174.82