Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02436 ATGGAAGGCAATAGACATGGCAAAACGAGCGTTTTGATGCTCCCATGGCTGGCTCACGGCCATGTCTCGCCGTTCTTCGAGCTAGCCAAATCCCTCCGCCGTAGAAACTTCCACATATACTTCTGTTCCACCTCCGTAATTCTCAACTCAATCCAACCAAATCTCACTCGAGATCTCTCCTCCGATATCGAGCTCGTCGAGCTAAAGTTACCAACCTCATCCGACCTCCCGCCCCACCGCCACACTACCGCCGGCCTCCCACCGCATCTCATGTTCTCGCTTAAGCGAGCTTTCGACTCGGCCGCCGCCACCTTCAGCATCATCCTCCATAACTTGAACCCGGACTTGGTCATCTATGATTTCTTGCAACCATGGGCACCTACTGTGGCTCGATCATCTCATATTCCCGCCATCATGTTCCAACCAACGGGCGCGCTTATGGCGGCTATGGTGAAGTACGAGTTGGAGTATCCGGGCTCGGATTTGAGCTCGATATTCCCAAATATTCGGCTCACCGAGTACGAGATTAAACAGGTCAAGAACTTGTTTAGATCATCAGTGAATGATACGAGGGATGAAGAAAGGATTAAGGAATGTAACGAGAGATCGTGTGGTATGATTTTGGTGAAATCATTCAGAGAAATTGAAGGCAAATATATTGATTTTCTCTCTATTTTGCTGCGGAAGAAGGTGGTTCCAGTGGGTCCATTAGTTCAAGAACCAGGAAACGACGTCGTATCAGGAAGTAGATTCGAAAAATGGCTAAACAAAAAAGAGGACTCATCTTGCTTACTCGTGTCATTCGGTAGCGAGTTTTACTTATCCAAAGAAGACATGGAAGAAATCGCTTATGGGCTCGAGCTTAGCCACGTGGACTTCATATGGGTCGTTAGGTTTCCGGTAGCCGGTGGAGGAGAGAGAAAGAAGAACGTTGAAGAAGAACTCCCTAAAGGATTTATAGAGAGAGTTAGAGAGAGAGGAATGGTGGTGGAAGGGTGGGTCCCACAAGCTCAGATTTTGAAACACCGTACCACCGGCGGCTTCCTCAGCCATTGTGGGTGGAGCTCCGTCATGGAGAGCATCAAGTTTGGTGTTCCGATCATCGCCGCCCCAATGCAGCTCGACCAACCGTTGAATGCTAGGTTGGTCGAGTGGCTCGACGTCGGTGTCGTCATCGAAAGAGACAATGGTCGCCTCCGCCGACAAGAAGTGGCCAGAGTTGTCAAAGAGGTGATTATCGGTATTAATTTTGATATCTTATTGGTTTTTCTTAATAAGGTAATGGTAGAGAAGATGGGAGAGAGAGTAAGGAAGAAGGTAAAGGAGTTTGCAGAGATGTTGAAGAAGAAAGGTGACGAAGAGATGGACATGGTGGTGGAAGAGCTAGTGAAGCTCTGCAAGAGCAACAAGGAAGATAATTTAGAGAGCCATTGGTATAGACCCGCCATTGATAGCCATTTTTGTGAACCTCGATGA 1476 47.97 MEGNRHGKTSVLMLPWLAHGHVSPFFELAKSLRRRNFHIYFCSTSVILNSIQPNLTRDLSSDIELVELKLPTSSDLPPHRHTTAGLPPHLMFSLKRAFDSAAATFSIILHNLNPDLVIYDFLQPWAPTVARSSHIPAIMFQPTGALMAAMVKYELEYPGSDLSSIFPNIRLTEYEIKQVKNLFRSSVNDTRDEERIKECNERSCGMILVKSFREIEGKYIDFLSILLRKKVVPVGPLVQEPGNDVVSGSRFEKWLNKKEDSSCLLVSFGSEFYLSKEDMEEIAYGLELSHVDFIWVVRFPVAGGGERKKNVEEELPKGFIERVRERGMVVEGWVPQAQILKHRTTGGFLSHCGWSSVMESIKFGVPIIAAPMQLDQPLNARLVEWLDVGVVIERDNGRLRRQEVARVVKEVIIGINFDILLVFLNKVMVEKMGERVRKKVKEFAEMLKKKGDEEMDMVVEELVKLCKSNKEDNLESHWYRPAIDSHFCEPR 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19418484 19421536 - Carg04609-RA Car04g02436 147861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02436 491 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Car04g02436 491 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 249 414 IPR002213 GO:0008194
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01486 Car04g02436 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02436 Car-Chr4:19418484 Car06g01380 Car-Chr6:9918564 6.41E-50 dispersed
Car01g00176 Car-Chr1:953323 Car04g02436 Car-Chr4:19418484 3.26E-17 transposed
Car04g00525 Car-Chr4:2943107 Car04g02436 Car-Chr4:19418484 7.80E-56 transposed
Car09g00528 Car-Chr9:2978409 Car04g02436 Car-Chr4:19418484 1.71E-66 transposed
Car20g00015 Car-Chr20:87818 Car04g02436 Car-Chr4:19418484 2.36E-148 transposed
Car18g00854 Car-Chr18:9576525 Car04g02436 Car-Chr4:19418484 4.27E-67 wgd
Car04g01486 Car-Chr4:8651086 Car04g02436 Car-Chr4:19418484 3.25E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02436 - - cmo:103496497 644.039