Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02441 ATGGCTTTAACAGCCCCAGGGCAGCTCAATGTTAACGAGTCCCCTTCGTGGGGATCTAGAGGTGTCGACTGCTTCGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTGAGAACAGGTGAAATAGTTGCACTCAAGAAAATACGAATGGATAATGAGAGGGAGGGGTTTGCTCTGCCATTATATGAGAAGACCAGAGTTGCCAGTGCTGGTTTTAGACTTGAAATTTCAAAATTCCCTATTACTGCCATTCGAGAAATCAAAATTCTAAAGAAGCTTCACCATGAAAATGTAATCAAATTGAAAGAGATTGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGGCATGTTCTCTAATGCATGGAATGAGTTTTTCTTATTGGATGGATCGCCTAGATGTGCAGATGGTAACAAGTACAAGGGTGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAGGCAGCTTCTCACAGGGCTCCACTATTGTCATGTAAATCAAGTACTGCATAGGGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATATCAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTATAGACCTCCTGAATTGCTTCTTGGGTCGACAAAATATGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGCAAGGACGAGCCGGAACAATTAAATAAGATCTTTGAGCTATGTGGCGCTCCGGATGAAGTCAATTGGCCCGGGGTTTCTAAAATCCCATGGTACAACAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAGCTGTTGGAGAAGATGCTCACTCTTGATCCTTCTCAGGGTGGGATCAGCTTGGGAACTGCTGCCAGTAGGGATAGGATATCTGCTAAGGATGCTCTAGATGCGGAGTATTTTTGGACAGACCCATTGCCTTGTGACCCTAAGAGTTTGCCAAAGTACGAATCATCACACGAGTTCCAGACGAAGAAGAAGCGTCAGCAGCAACGACAACATGAAGAAACTGCAAAGAGACAGAAGTTGCAACACCAGCAGCATTCACGCCTCCCACCTATACAGCAGTCAGGACAAGCTCATGCACAGATGCGACCAGTACCTAACCAACCCCTTCATGGTTCTCAACCCCCCGTTGCTGCAGGGCCTAGCCATCATTTTGGTGGGAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCTCTGGTGGAAATCCTCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAAGCGGGGGTTCTTATGGCAATGCACAATACGCTCAAGGACGAGGTGCACCATATGGTTCTGGTAATATGTCTGGTGCTGGTCCTCGAGGCGGAGCTGGAGCCGGTGGTGGTGGTGGTTATGGCGCGGGAGCTCCAAATTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGGCGTGGCTCCAATGTAATGGGTGGAAACCGAAACCAACAATATGGATGGCAACAATGA 1722 46.75 MALTAPGQLNVNESPSWGSRGVDCFEKLEQIGEGTYGQVYMARELRTGEIVALKKIRMDNEREGFALPLYEKTRVASAGFRLEISKFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPGMFSNAWNEFFLLDGSPRCADGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDINANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQGGISLGTAASRDRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHQQHSRLPPIQQSGQAHAQMRPVPNQPLHGSQPPVAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQSGGSYGNAQYAQGRGAPYGSGNMSGAGPRGGAGAGGGGGYGAGAPNYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19443442 19449031 - Carg04604-RA Car04g02441 147866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02441 573 MobiDBLite consensus disorder prediction 391 420 - -
Car04g02441 573 ProSiteProfiles Protein kinase domain profile. 25 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02441 573 Pfam Protein kinase domain 25 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02441 573 Coils Coil 403 423 - -
Car04g02441 573 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Car04g02441 573 MobiDBLite consensus disorder prediction 389 573 - -
Car04g02441 573 MobiDBLite consensus disorder prediction 484 503 - -
Car04g02441 573 MobiDBLite consensus disorder prediction 424 441 - -
Car04g02441 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Car04g02441 573 MobiDBLite consensus disorder prediction 545 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02441 Car-Chr4:19443442 Car20g00013 Car-Chr20:77129 0 dispersed
Car18g00857 Car-Chr18:9596081 Car04g02441 Car-Chr4:19443442 5.18E-77 dispersed
Car04g02441 Car-Chr4:19443442 Car04g00518 Car-Chr4:2917917 4.54E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88854 PF00069 Pkinase 4.80E-63 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02441 K08819 - csv:101220936 921.383