Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g02441 | ATGGCTTTAACAGCCCCAGGGCAGCTCAATGTTAACGAGTCCCCTTCGTGGGGATCTAGAGGTGTCGACTGCTTCGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTGAGAACAGGTGAAATAGTTGCACTCAAGAAAATACGAATGGATAATGAGAGGGAGGGGTTTGCTCTGCCATTATATGAGAAGACCAGAGTTGCCAGTGCTGGTTTTAGACTTGAAATTTCAAAATTCCCTATTACTGCCATTCGAGAAATCAAAATTCTAAAGAAGCTTCACCATGAAAATGTAATCAAATTGAAAGAGATTGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGGCATGTTCTCTAATGCATGGAATGAGTTTTTCTTATTGGATGGATCGCCTAGATGTGCAGATGGTAACAAGTACAAGGGTGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAGGCAGCTTCTCACAGGGCTCCACTATTGTCATGTAAATCAAGTACTGCATAGGGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATATCAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTATAGACCTCCTGAATTGCTTCTTGGGTCGACAAAATATGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGCAAGGACGAGCCGGAACAATTAAATAAGATCTTTGAGCTATGTGGCGCTCCGGATGAAGTCAATTGGCCCGGGGTTTCTAAAATCCCATGGTACAACAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAGCTGTTGGAGAAGATGCTCACTCTTGATCCTTCTCAGGGTGGGATCAGCTTGGGAACTGCTGCCAGTAGGGATAGGATATCTGCTAAGGATGCTCTAGATGCGGAGTATTTTTGGACAGACCCATTGCCTTGTGACCCTAAGAGTTTGCCAAAGTACGAATCATCACACGAGTTCCAGACGAAGAAGAAGCGTCAGCAGCAACGACAACATGAAGAAACTGCAAAGAGACAGAAGTTGCAACACCAGCAGCATTCACGCCTCCCACCTATACAGCAGTCAGGACAAGCTCATGCACAGATGCGACCAGTACCTAACCAACCCCTTCATGGTTCTCAACCCCCCGTTGCTGCAGGGCCTAGCCATCATTTTGGTGGGAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCTCTGGTGGAAATCCTCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAAGCGGGGGTTCTTATGGCAATGCACAATACGCTCAAGGACGAGGTGCACCATATGGTTCTGGTAATATGTCTGGTGCTGGTCCTCGAGGCGGAGCTGGAGCCGGTGGTGGTGGTGGTTATGGCGCGGGAGCTCCAAATTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGGCGTGGCTCCAATGTAATGGGTGGAAACCGAAACCAACAATATGGATGGCAACAATGA | 1722 | 46.75 | MALTAPGQLNVNESPSWGSRGVDCFEKLEQIGEGTYGQVYMARELRTGEIVALKKIRMDNEREGFALPLYEKTRVASAGFRLEISKFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPGMFSNAWNEFFLLDGSPRCADGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDINANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQGGISLGTAASRDRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHQQHSRLPPIQQSGQAHAQMRPVPNQPLHGSQPPVAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQSGGSYGNAQYAQGRGAPYGSGNMSGAGPRGGAGAGGGGGYGAGAPNYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ | 573 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 19443442 | 19449031 | - | Carg04604-RA | Car04g02441 | 147866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g02441 | 573 | MobiDBLite | consensus disorder prediction | 391 | 420 | - | - | |
Car04g02441 | 573 | ProSiteProfiles | Protein kinase domain profile. | 25 | 378 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g02441 | 573 | Pfam | Protein kinase domain | 25 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car04g02441 | 573 | Coils | Coil | 403 | 423 | - | - | |
Car04g02441 | 573 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Car04g02441 | 573 | MobiDBLite | consensus disorder prediction | 389 | 573 | - | - | |
Car04g02441 | 573 | MobiDBLite | consensus disorder prediction | 484 | 503 | - | - | |
Car04g02441 | 573 | MobiDBLite | consensus disorder prediction | 424 | 441 | - | - | |
Car04g02441 | 573 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672|GO:0006468 | |
Car04g02441 | 573 | MobiDBLite | consensus disorder prediction | 545 | 573 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g02441 | Car-Chr4:19443442 | Car20g00013 | Car-Chr20:77129 | 0 | dispersed | |
Car18g00857 | Car-Chr18:9596081 | Car04g02441 | Car-Chr4:19443442 | 5.18E-77 | dispersed | |
Car04g02441 | Car-Chr4:19443442 | Car04g00518 | Car-Chr4:2917917 | 4.54E-110 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88854 | PF00069 | Pkinase | 4.80E-63 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g02441 | K08819 | - | csv:101220936 | 921.383 |