Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02484 ATGAATAGAGGAATGGATTCAGTGATAGAACCAATGAGGAACGTTGAGAAGTGTTTAGATTCTCAGCTATGGCATGCTTGTGCTGGTGGGATGGTTCAAATGCCTTCTGTTAACTCTAAGGTAGTCTACTTTCCCCAGGGCCACGCCGAGCATGCTCAGGGGAATGTCGATTTTGGGAACGCTCGGATTCCTTCACTCATTCCTTGTAGGGTGTCTGCTACTAAATATATGGCAGATCTTGAAACGGATGAGATTTTTGCTAAGATAAGTTTGCTTCCATTGAGGAACAATGAATTCAATTTGGATGACGACGACGAGCTGCTTGGACACGATGATATTAGGAACCAGGAGAAACCGTCTTCCTTTGCCAAGACATTGACGCAATCTGATGCGAACAATGGTGGAGGATTCTCTGTTCCTCGCTATTGTGCCGAGACTATCTTTCCTCCGTTGGATTACTCGGCAGAACCTCCTGTTCAGACCATTCTTGCCAAGGATGTTCATGGTGAGATTTGGAAGTTTAGACATATATACAGAGGGACTCCCCGTCGCCATCTTTTGACGACGGGGTGGAGTAATTTTGTGAATCAGAAGAAGCTTGTTGCAGGGGACTCGATTGTTTTCCTCCGGGCTGAAACGGGTGATCTTTGTGTCGGAGTTAGGCGAGCCAAGAGGGGAATTGGTTGCGGAATTGATTACTCACCTGGGTGGAACCCTGCAAATTCAGGCTCTTCACTTATGGGGTATTCTGATTTCATGAGAGAAAATGAAGGTAGAATGGTAAGACGACACTCAAACGGGAACCTTAACGGGAGAGTGAAGGTTGAATCCGTCATCGAAGCTGCAACGCTTGCTGCCAGTGGCAAGCGCTTCGAGATTGTGTACTACCCATGTGCTGGCACTCCAGAATTTGTTGTTAGGGCCTCTACTGTAAGATCTGCTATGCAAATTCATTGGTATTCTGCTATGAGATTTAAGATGCCTTTTGAAACCGAGGATTCGTCTCGGATAAGCTGGTTTATGGGAACGATATCTTCGATCCAGGTTGCCGATCCTGTTCGGTGGCCTGATTCTCCATGGCGAATGCTGCAGGTGTCATGGGATGAGCCAGATTTACTACAAAATGTGAAGAGTGTTAACCCCTGGTTGGTTGAAGTGGTAGTAAACATGCCAGCAATCCATGTCTCCCCCTTCTTGCCACCAAGAAAGAAGCCACGTTATCCGCTTCCGGCCGAAACTGCTGTATTTGGTCACCTTCCGATGCCATCGTTTTCGACTAATTTCTTCGAAGCAACCAACCCGTTTCAAAGCATTACGGCGAGCAACATTCCTGCAGGCATACAGGGAGCCAGGCATACTCAATTTGGACTCTCTTCATCCAACCTCCAAATCAGCATACCGCCTTTGGGACAGTTTCCCGCCAGTCTTAAGCACCTTGAAGGTGCCACTCCGATCCCTGTTGTCCGTGGCGAGGATAGCTTCGGAGGCACGAAAAGCCCTGATAATCATTCTCATTGGCTAACAGTGGGAAATCATATCCAAAGCTCAAAAGAAAGCAAAGAAACAAAACCAGATCATATCATATTGTTTGGCCAACTCATTCTTCCTAATCAACAGAGTTCTAACAGCTCCTCGGGCGATACGACGAACGCATCCGATGCAAATCTAGAGAAAGCGTCGAATCTTTCTGATGGTTCTGGCTTGTCATCACAGCAGAACGGTTCACTGGACAATTCATCAGATGGAGGGTCTACGTCATACAACGGTCCAAACAAAACTGGTCTAAGCTTGGACATTGGTCATTGCGAGGTGTTTATGGAGTTGGAGAATGTCAGTCACACGCTCGACCTGTCGGTCCTTGGATCGTACGAAGAATTGTATAGAAAGCTCGGCAACATGTTTAGCGTAGGACGGTCAGAGATGCTGAATTCTGTTCTTTATCAGGATGCTCTTGGTGCTACAAAGCAAGCTGGAGATGAGCCTTTCAGGTAA 1992 46.89 MNRGMDSVIEPMRNVEKCLDSQLWHACAGGMVQMPSVNSKVVYFPQGHAEHAQGNVDFGNARIPSLIPCRVSATKYMADLETDEIFAKISLLPLRNNEFNLDDDDELLGHDDIRNQEKPSSFAKTLTQSDANNGGGFSVPRYCAETIFPPLDYSAEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAETGDLCVGVRRAKRGIGCGIDYSPGWNPANSGSSLMGYSDFMRENEGRMVRRHSNGNLNGRVKVESVIEAATLAASGKRFEIVYYPCAGTPEFVVRASTVRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTISSIQVADPVRWPDSPWRMLQVSWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFLPPRKKPRYPLPAETAVFGHLPMPSFSTNFFEATNPFQSITASNIPAGIQGARHTQFGLSSSNLQISIPPLGQFPASLKHLEGATPIPVVRGEDSFGGTKSPDNHSHWLTVGNHIQSSKESKETKPDHIILFGQLILPNQQSSNSSSGDTTNASDANLEKASNLSDGSGLSSQQNGSLDNSSDGGSTSYNGPNKTGLSLDIGHCEVFMELENVSHTLDLSVLGSYEELYRKLGNMFSVGRSEMLNSVLYQDALGATKQAGDEPFR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19754210 19757069 + Carg04561-RA Car04g02484 147909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02484 663 MobiDBLite consensus disorder prediction 558 589 - -
Car04g02484 663 Pfam Auxin response factor 281 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car04g02484 663 MobiDBLite consensus disorder prediction 487 507 - -
Car04g02484 663 ProSiteProfiles B3 DNA-binding domain profile. 122 224 IPR003340 GO:0003677
Car04g02484 663 Pfam B3 DNA binding domain 122 223 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02484 Car15g00425 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02484 Car-Chr4:19754210 Car05g00429 Car-Chr5:2460737 4.63E-93 dispersed
Car12g00131 Car-Chr12:748675 Car04g02484 Car-Chr4:19754210 1.21E-08 dispersed
Car20g00432 Car-Chr20:2434138 Car04g02484 Car-Chr4:19754210 4.61E-38 dispersed
Car15g00425 Car-Chr15:2215835 Car04g02484 Car-Chr4:19754210 2.28E-147 wgd
Car02g00643 Car-Chr2:4856852 Car04g02484 Car-Chr4:19754210 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3464 PF02362 B3 4.40E-21 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02484 - - cmo:103496426 1095.11