Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02610 ATGGAGATTCCTTCAGAAAAAAGATATCCAGTGAATGCCAAGGATTATAACTTACATGAAGAAGTTGGTGAAGGCGTCAGTGCCACTGTGTACAAGGCACTGTGCATTCCACTAAAGGAGACTGTCGCTATAAAGGCTCTTGATTTGGAGAAGTGCAACAATGACCTAGATGGTATTCGGCGAGAGGTTCAAACGATGACTTTGATTGATCATCCAAATTTGTTAAAAGCACATTGTTCCTTCACTGCTGGTCACCACCTCTGGGTTGTGATGCCATACATGTCTGGGGGATCTTGCCTTCATATTATGAAATCTGCTTTTTCTGAAGGTTTTGATGAGCCTGTCATAGCTACCCTATTGCGGGAGGTTCTGAAAGCTCTTGTTTATCTTCATGCTCATGGCCACATCCATAGAGATGTGAAGGCTGGGAATATTTTGCTTGATTCTAATGGTACAGTAAAACTAGCTGATTTTGGAGTCTCGGCTTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACATTTGTTGGAACTCCATGCTGGATGGCACCGGAAGTTATGCAGCAATTACATGGATATGACTTCAAGGCAGACATTTGGTCATTTGGAATAACAGCGCTTGAACTGGCTCATGGGCATGCTCCATTTTCTAAATACCCACCAATGAAAGTTTTGCTAATGACATTACAAAATGCTCCTCCTGGTCTTGACTATGAAAGAGATAGGAAATTTTCTAAGGCAAAGGAGGCTGATCTTCTGGTGCAGAACAAGGCTTTGTATGGAGACAAGGAGCATTTGTCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAACCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGATGATATGTCAAACATGGAAGATCTAGATGTACATACAACAATGCAAAGAAACAAGAATAATGATTTTAGCTTTCCAGTAGAGGGTTCATCCCTTGAAAGTCCGAATCACCGAAGTGCTGCCGCTAGTCAGGAGGATGGTTTCAGTGATCTACATTATTTGGAGAGTTCCCTTGCTTCTTTCCCTACAAAACCTCTTGAAGCACTCAAAGATTGTTTTGACATCTATGAAGATATAAGCACGGACAGTGTAAGGCCAGTCAATAGAGAAAATGGAAGAATCGAGGGTGAGAGTTCAGGGCAAAGTGGTCCCCTACCACGTCATTACATGTCAGAGAATAAGAGGTCTTATAGTGGTTCATTAATTTCTGACAATGCTGGTTCTCCTAAAAAGATTGTTGTAGATGGTGATAGGTAA 1305 41.69 MEIPSEKRYPVNAKDYNLHEEVGEGVSATVYKALCIPLKETVAIKALDLEKCNNDLDGIRREVQTMTLIDHPNLLKAHCSFTAGHHLWVVMPYMSGGSCLHIMKSAFSEGFDEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKAKEADLLVQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNMEDLDVHTTMQRNKNNDFSFPVEGSSLESPNHRSAAASQEDGFSDLHYLESSLASFPTKPLEALKDCFDIYEDISTDSVRPVNRENGRIEGESSGQSGPLPRHYMSENKRSYSGSLISDNAGSPKKIVVDGDR 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20415074 20420589 - Carg04435-RA Car04g02610 148035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02610 434 Pfam Protein kinase domain 16 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02610 434 MobiDBLite consensus disorder prediction 315 339 - -
Car04g02610 434 MobiDBLite consensus disorder prediction 380 434 - -
Car04g02610 434 ProSiteProfiles Protein kinase domain profile. 16 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02610 434 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Car04g02610 434 MobiDBLite consensus disorder prediction 315 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02610 Car15g00325 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02610 Car-Chr4:20415074 Car15g00325 Car-Chr15:1742580 2.89E-113 dispersed
Car14g00592 Car-Chr14:3272216 Car04g02610 Car-Chr4:20415074 4.19E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88858 PF00069 Pkinase 4.60E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02610 K08835 - csv:101205102 794.267