Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02620 ATGGATCCGAACTTGATCTGGGGTTATCCTGAAAAGAGGGATTCATGGAGGACAATTTTCACTTTGGCTTATCAGGGTTTGGGGGTTGTTTATGGGGATTTGAGCACTTCTCCGCTGTATGTGTACAAAAGCACTTTTGCAGAAAACCTTCAGCACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTCATAGTTCTTAAAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCACTGCTCTGCCGCCATGCTCGCCTTAGCTCCCTTCCAAATCACCAGCTTGCAGATGAGGAGCTTTCTTCTTATACAAGAGACATACCTGAACCCACTAGTAATTTTAGTTTCAGTTCTTGTTTGAAATCAACTCTGGAGAAATGTAAAGTTTTGCAGAGAATCTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATCGGTGATGGAGTTCTCACACCAGCAATTTCAGTCTTTTCAGCTGTGTCAGGGGTTGAGTTATCCATGGCTAAGGAACATCACCAATATATTAAAGTCCCTCTGGCATGTGCCATTTTGGTATTCTTGTTTGCATTGCAACATTACGGCACACATCGGGTCGGGTTCCTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCTCTTGTTTACAAAGCACTCTCCCCATATTACATGTATAAGTTCTTGAAAAAAACCAAAAAGCAAGGTTGGATGGCGTTGGGCGGAGTCCTCTTGTGTATAACGGGCTCGGAAGCAATGTTTGCTGATCTTGGACACTTTTCACCTTTTTCTATCAAGCTTGCTTTCACTTTTGTGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAACGATTATCGAATCGGATTCTATGTTTCTGTTCCTGAGAAAGTAAGATGGCCTGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGCAGTCAAGCAATCATTACGGGCACGTTTTCGATCATCAAACAATGTTCTTCTTTGGGTTGTTTTCCAAGAGTAAAGATCGTTCATACGTCTTCGAAAATACATGGCCAGATTTACATTCCCCTCATCAACTGGATACTAATGATATTATGTTTAGCTGTTACCATTGGATTTCGAGAGACAGAACGCTTGGGCAATGCAGCAGGGTTGGCAGTTATTACCGTTATGCTAGTCTCGACGTGTCTAATGTCACTTGTTATTGTGTTATGTTGGCATAAAACTGTCTTCCTAGCCATAGCCTTCCTAGTCTTCTTTGGCTCCATAGAAGCTCTCTACTTTTCTGCCTCTCTTATGAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCACTTTCATTGACATTCCTTGTGGTTATGTATGTTTGGCACTATGGCACTCTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCGGTATAGGTCCCAAAATCGGGATCGTTCGGGTTCGGGGGATTGGCCTTGTACATACCGAACTCGTTTCAGGGATCCCTTCCATTTTCTCTCATTTTGTCACAAACGTTCCAGCCTTCCACCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAATGCCTCATGTGAGACCTGAGGAAAGGTTCTTGGTAGGAAGAGTTGGGCCAAAGGAGTATCGACTCTACCGCTGCATTGCACGATATGGCTACCGTGATGTGCACAAGGACGACTTGGAATTCGAGAGAGACCTTGCCTGCAGCATTGCAGAATTCATCCGATCCGAGAAAACAGAATGCAACACTTCCAGACACGAGGACTTGGATGACAATGACGACAACGAAAGAATGAGAGTGATTGGGACTTCATCAACTCAACTAAACGGTATACGAATGTGTGAAAACGAATCGTGTTCTTTGCCGATCGCCAGCAGTTCAGAGATAAGGTCGGAGAGGTTGAGGAAGAAAAGAGTAAGATTCGTTCTACCCGAAAGTACGAAAATGGATGTCGATACGAGGAGAGAGCTGCAAGAGTTGATGGAAGCAAGGGAGGCAGGAATGGCATTCATAATGGGACATTCATACGTAAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGGTTGTGCTTAATTATGGGTATGATTTCTTGAGGAAAAACTCAAGAGGCCCGTCTTATGCTTTGAGTATTCCCAATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2328 42.83 MDPNLIWGYPEKRDSWRTIFTLAYQGLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLKADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSSYTRDIPEPTSNFSFSSCLKSTLEKCKVLQRILLVLALIGTCMVIGDGVLTPAISVFSAVSGVELSMAKEHHQYIKVPLACAILVFLFALQHYGTHRVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGVLLCITGSEAMFADLGHFSPFSIKLAFTFVVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPLINWILMILCLAVTIGFRETERLGNAAGLAVITVMLVSTCLMSLVIVLCWHKTVFLAIAFLVFFGSIEALYFSASLMKFFEGAWVPIALSLTFLVVMYVWHYGTLKKYEADVENKVPINWLLGIGPKIGIVRVRGIGLVHTELVSGIPSIFSHFVTNVPAFHQILVFLCIKSVTMPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFERDLACSIAEFIRSEKTECNTSRHEDLDDNDDNERMRVIGTSSTQLNGIRMCENESCSLPIASSSEIRSERLRKKRVRFVLPESTKMDVDTRRELQELMEAREAGMAFIMGHSYVKAKKGSGWMKKVVLNYGYDFLRKNSRGPSYALSIPNASTLEVGMVYYV 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20458498 20463248 + Carg04425-RA Car04g02620 148045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02620 775 Pfam K+ potassium transporter 24 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02620 Car14g00580 CCT
Car04g02620 Car14g00580 ECH
Car04g02620 Car15g00311 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01748 Car-Chr4:10032393 Car04g02620 Car-Chr4:20458498 0 dispersed
Car04g02620 Car-Chr4:20458498 Car16g00593 Car-Chr16:3760284 0 dispersed
Car14g00580 Car-Chr14:3154773 Car04g02620 Car-Chr4:20458498 2.30E-89 wgd
Car15g00311 Car-Chr15:1680919 Car04g02620 Car-Chr4:20458498 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02620 K03549 - csv:101218141 1411.74