Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02638 ATGAAAATCTCCTCCAGCTTCCTTCTCTATCATCATCTTCTTCTTCTTCTTCTACTTTCTGCTTCTTTGTCTTCTTCTGCAGTTCAGGAAGACGACATAAGATGTCTTCGAGGGGTTAAGGATTCGCTCGTTGATCCTCTTGGAAAGCTCAGTTCCTGGGATTTCAAGAACACGTCGGTCGGGAATCTTTGCAATAAATTTGTCGGACTGTCTTGCTGGAACGACCGGGAGAATCGCATTCTGAGCCTTGAGCTCAGAGATATGGCGCTCTCTGGTTCCATTTCTGAGGATTTGCAGTACTGTGTGAGCCTGCAGAGACTGGATCTGTCTGGTAATTCCTTTTCCGGTGCGATTCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTAATTTGGATTTGTCCAACAATCAATTTTCCGGCCCTATTCCGGCTGATCTCGCCGGATGTTCTTATCTGAATTCGTTAATGTTGTCTAATAATGCGCTTTCGGGTACGATACCAGTTGAGCTTACGAGTTTGAGTAGGCTTAATAAATTTTCTGTTGCGAACAATCATCTCACTGGTTCGATTCCCGAATCTTTTAATAAATTTGGGAGTGAGGATTTTGATGGGAACAGTGAGTTATGTGGAGGGCCTGTTGGATCGAGCTGTGGTGGGCTGAGCAAGAAAAATCTAGCCATTATTATAGCTGCTGGTGTGTTTGGTGCTGCAGCTTCTCTGTTATTAGGTTTTGGGTTATGGTGGTGGTATCATTCTAGGATGAACATGAAGAAAAGAAGGGGATATAGGGATGGGAGTAATGGGGATTGGGCTGATAGATTAAGAGCCTATAAGCTAGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAGTTAGCTGATTTGTTAACTGCTACGAACAATTTCAATGGTGAAAATATAATGGTTTCTTCTAGAACTGGAACTACATATAGAGCTGCTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACCTGCAAGCTTGGTGAGAAGCTGTTTCGGACGGAGATGAACCGGTTAGGATCGTTGAGGCACCCGAATTTGACACCCCTTTTGGGATTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGGACTTTGGCTTCTTTGTTACATGGAAATGGTGAGATATTGGATTGGGCAACTAGGTTTAGGATTGGTTTGGGTGCAGCTAGGGGTCTTGCTTGGCTTCACCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGATGAGTATGATGCTAGGATCATGGATTTTGGATTGGCAAGGTTAATGGCTTCGGATTCTCACGACAGTAGTTTCGTTAATGGAGATTTAGGGGAGCTCGGTTACATTGCTCCCGAATATCCCAGCACCATGGTTGCTTCTCTAAAAGGGGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGCCAAAAACCTCTAGAAGTCACGAAAGCAGAGGAAGGCTACAAGGGTAACTTGGTGGATTGGGTTAATCAGCTAAGTAGTTCGGGTCGAATCAAGGACGTTATCGATAAAAGTCTTTGTGGAAAAGGGAACGACGACGAAATCTTACAACTTCTGAAAATTACAATGAACTGCATTGTTTCTAGGCCCAAGGACAGGTGGTCTATGTATCAGGTTTATCAGTCAATGAAATCAATGGCTAAGGACTACAGTTTCTCTGAACCAGACGATGCGTTCCCACTTTTACTCGGCAAGGGAGATAACGAACCCGTGTAG 1815 43.58 MKISSSFLLYHHLLLLLLLSASLSSSAVQEDDIRCLRGVKDSLVDPLGKLSSWDFKNTSVGNLCNKFVGLSCWNDRENRILSLELRDMALSGSISEDLQYCVSLQRLDLSGNSFSGAIPPHICKWLPYLVNLDLSNNQFSGPIPADLAGCSYLNSLMLSNNALSGTIPVELTSLSRLNKFSVANNHLTGSIPESFNKFGSEDFDGNSELCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKKRRGYRDGSNGDWADRLRAYKLVQVSLFQKPLVKVKLADLLTATNNFNGENIMVSSRTGTTYRAALPDGSVLAIKRLNTCKLGEKLFRTEMNRLGSLRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLASLLHGNGEILDWATRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDDEYDARIMDFGLARLMASDSHDSSFVNGDLGELGYIAPEYPSTMVASLKGDVYGFGVVLLELVTGQKPLEVTKAEEGYKGNLVDWVNQLSSSGRIKDVIDKSLCGKGNDDEILQLLKITMNCIVSRPKDRWSMYQVYQSMKSMAKDYSFSEPDDAFPLLLGKGDNEPV 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20567192 20569006 + Carg04407-RA Car04g02638 148063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02638 604 Gene3D Phosphorylase Kinase; domain 1 266 379 - -
Car04g02638 604 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Car04g02638 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02638 604 Gene3D Transferase(Phosphotransferase) domain 1 380 591 - -
Car04g02638 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 598 - -
Car04g02638 604 Gene3D Ribonuclease Inhibitor 29 220 IPR032675 -
Car04g02638 604 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Car04g02638 604 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515
Car04g02638 604 Pfam Protein tyrosine and serine/threonine kinase 330 574 IPR001245 GO:0004672|GO:0006468
Car04g02638 604 PANTHER RECEPTOR-LIKE PROTEIN 55 7 598 - -
Car04g02638 604 SUPERFAMILY L domain-like 29 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02638 Car-Chr4:20567192 Car17g01231 Car-Chr17:9377283 2.59E-168 dispersed
Car15g00289 Car-Chr15:1567658 Car04g02638 Car-Chr4:20567192 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88859 PF07714 PK_Tyr_Ser-Thr 1.30E-29 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02638 - - cmos:111445255 1045.03