Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02689 ATGCCTTCTCTCCCTGGCTTCCCTTTCTCCTCTCCCATGTGGAGCGAGCTTTGCCTGAGGCGAGCCACCCCTTCACTCGATGTCCACGACAACATTAACAATACCACCACCGCTGCCGATGAACACCCCATCTCCAACGCCGTTGAGTGCTACGCCTGCACCCAAGTCGGTGTTCCGGCCTTCCATTCCACCAGCTGTGACCATGCCCACCAGCAGCCCGAATGGGAGGCCTCCGCCGGCTCTTCCCTCGTCCCCATTCAACCCACAAAGACCTCTCCTCGCCGCGCCGACCCACAACATCGTTCCGGTCGCTTCGGCAGTGTTCTGGACCCTAGAACCAAGCGGGTCCAACGATGGAACCGGGCTCTGTTATTAGCCCGTGGAATGGCCCTCGCCGTCGATCCTCTCTACTTCTACGCGCTCTCAATCGGACGTGGTGGGTCGCCGTGCCTGTACATGGACGGTGGATTAACCGCCGTTGTTACTGTTCTCCGCACGTTCCTCGATGTCGTGCACTTGTGGCACGTTTGGCTCCAGTTCCGCCTCGCCTATGTGTCCAAGGAGAGCATGGTCATTGGCTGCGGCAAACTCGTCTGGGACGCTCGTGATATCGCCTCCCACTATGTCCGTTCCTTCAAAGGCTTCTGGTTCGATGCCTTCGTGATCCTCCCAGTTCCTCAGATTGTTTATTGGTTGGTTTTACCAAAACTAATCAGAGAAGAGAGAATCAAGCTTATAATGACAGTAATCTTGTTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGACAAGAATGCAAAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGACTCAATCTCATTGCCTATTTCATCGCCTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCTTGCTCAGAGGAGGTGTGTTATCAGTTTCTCTCATCTTCTACAACCATAGGAAATTCGTGTGGTCGTAATTCGACTTCTGCCTTTAGGAAGCCCATATGCTTGGATGTTAATGGTCCATTTGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCTAGCAATTCCATTGCTGTCAAAATTCTTTATCCCATCTTTTGGGGCTTAATGACTCTTAGCACGTTTGGCAATGATCTCGAGCCCACGAGTAATTGGCTAGAAGTATGTTTTAGTATTTGCACAGTACTGAGTGGATTGCTGCTTTTTACTCTTTTGATTGGTAACATCCAGGTTCTTTTGCACGCCGTCATGGCAAGGAGGCGAAAAATGCAGCTGAGATGTCGAGATTTAGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGACATCGAGTTCGACACTATGAACATCAGAGATGGGCAGCCATGGGTGGAGAAGATGAGATGGAACTGATCAATGATTTGCCTGAAGGTCTTAGAAGAGACATTAAACGCCATCTTTGCGTTGATCTTATCAGAAAGGTGCCGCTGTTCCAAAACCTGGATGAGCTGATTCTCGACAACATCTGCGACCGAGTCAAGCCACTTGTATTTTCCAAGGATGAAAAGATTATCAGAGAAGGAGATCCTGTTCCAAGAATGCTATTCATAGTGTGTGGACGTGTAAAACGTAACCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTTGCTAGAATCGGGAGGATTTCTGGGCGACGAGCTGCTATCGTGGTGTCTTCGGCGCCCATTTCTGGAGAGGCTTCCGGCTTCATCAGCTACATTTGTATGCATTGAACCAACAGAAGTATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGCTACAAATTTGCCAATGAACGACTGAAGAGAACTGCAAGATATTACTCCTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTTGCTTGGCGTCGCTACAGAAAGAGGATGAGACGTCCAGTGATAACTGTGGTGGAAAATGGAAGCAATGAACGTAGGCTTCTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACATGACCATCTTGAATAG 2133 48.71 MPSLPGFPFSSPMWSELCLRRATPSLDVHDNINNTTTAADEHPISNAVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKTSPRRADPQHRSGRFGSVLDPRTKRVQRWNRALLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLTAVVTVLRTFLDVVHLWHVWLQFRLAYVSKESMVIGCGKLVWDARDIASHYVRSFKGFWFDAFVILPVPQIVYWLVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMTRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLSSSTTIGNSCGRNSTSAFRKPICLDVNGPFAYGIYKWALPVISSNSIAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRHRVRHYEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLDELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRNQSLSKGMTATSLLESGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEVFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVITVVENGSNERRLLQYAAMFMSFRPHDHLE 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20863967 20867884 - Carg05873-RA Car04g02689 148114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02689 710 ProSiteProfiles cAMP/cGMP binding motif profile. 523 602 IPR000595 -
Car04g02689 710 MobiDBLite consensus disorder prediction 76 107 - -
Car04g02689 710 Pfam Ion transport protein 127 442 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car04g02689 710 MobiDBLite consensus disorder prediction 76 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02689 Car-Chr4:20863967 Car16g00821 Car-Chr16:5402498 0 dispersed
Car04g02689 Car-Chr4:20863967 Car12g00767 Car-Chr12:7356547 1.59E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02689 K05391 - csv:101203560 1289.63