Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02713 ATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAACGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCGACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTGATTTCTAGGCGCGAGAAGGGTTCAAGCCATTTACACGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGATTCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATATACCTCAGAGAATCCCAAGATAGTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGGTATGCCTCTTTTTCTCCATCATATCATATGAACTTGTTCAATCACTATCTCAAAGCCACCCTATTAGTTGCGTTCTAGTGACTCGGATTGATGTTCGGATCTTTTTATGTTTTGGAAGTTCTGTGTTTTCTCCTTCACTGGTGAAGCTTTGGGGAATGATCTTGAAACGCGATCCTTAG 837 43.13 MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGATSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRGEVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKVCLFFSIISYELVQSLSQSHPISCVLVTRIDVRIFLCFGSSVFSPSLVKLWGMILKRDP 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20987428 20990417 - Carg05897-RA Car04g02713 148138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02713 278 Pfam Ring finger domain 176 217 IPR001841 -
Car04g02713 278 MobiDBLite consensus disorder prediction 103 123 - -
Car04g02713 278 MobiDBLite consensus disorder prediction 56 89 - -
Car04g02713 278 MobiDBLite consensus disorder prediction 56 76 - -
Car04g02713 278 MobiDBLite consensus disorder prediction 103 129 - -
Car04g02713 278 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02713 Car15g00226 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02713 Car-Chr4:20987428 Car15g01116 Car-Chr15:8804557 7.92E-26 dispersed
Car15g00226 Car-Chr15:1274735 Car04g02713 Car-Chr4:20987428 6.35E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02713 - - csv:101207736 413.305