Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car04g02832 | ATGGCGAGTAGATGGTGGAGTGGAATTGGAATTGGAATTGAAGATCAGCATGGAGCTAAAATCCACAGGCGCCGTCGAGGTCGCCCACCGGGCTCAAAAAACAAGCCAAGGCCACCCATTCTCATAACCAACCACGCTCCCAACGCCTTCCAAACCCACGTATTCCAAATCACCCCCGCCACCGACATAGCCCATTCCATTTCCACCTTCGCCCACCGCCGCCACTGCGGACTCTCCATTCTCAGCAGCTCCGGCCTCGTCGCCAACGTCACTCTCTGCCAACCCGCTGCCCCTGGCGGCGTCATCACTCTCCATGAACGCTTCGAGATCTTGTCACTCTCTGGCGCTTTCCTTCCCGCACCGTCCCCCCAGTGGGCTACTAGCTTGACCGTCTGTCTAGCCGCCGGCCAGGGACGGGTCGTCGGCGGCCTGGTTTCCGGTCCCCTCATCGCCGCCGGCCCTGTGATAGTAATTGCAGCTTCGTTTACAAACGCTATATATGAAAGATTACAGATTGAGGAAATGGAAATGGAAGATCATAGTAATGGAAAAAATTCAATGGGGGAATCATCAGGAGGAGCTTCTTTGGCAGTTCATAATTTGATTTCAAATACCCAAATTTCTCAAGATGTGTTTTGGCCTCAACTTCCTCCATCGTATTAA | 663 | 53.24 | MASRWWSGIGIGIEDQHGAKIHRRRRGRPPGSKNKPRPPILITNHAPNAFQTHVFQITPATDIAHSISTFAHRRHCGLSILSSSGLVANVTLCQPAAPGGVITLHERFEILSLSGAFLPAPSPQWATSLTVCLAAGQGRVVGGLVSGPLIAAGPVIVIAASFTNAIYERLQIEEMEMEDHSNGKNSMGESSGGASLAVHNLISNTQISQDVFWPQLPPSY | 220 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 21551383 | 21552045 | + | Carg06017-RA | Car04g02832 | 148257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car04g02832 | 220 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
| Car04g02832 | 220 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 52 | 164 | IPR005175 | - | |
| Car04g02832 | 220 | ProSiteProfiles | PPC domain profile profile. | 47 | 190 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g02832 | Car-Chr4:21551383 | Car06g01150 | Car-Chr6:8516857 | 1.80E-55 | dispersed | |
| Car15g00111 | Car-Chr15:651206 | Car04g02832 | Car-Chr4:21551383 | 7.55E-89 | wgd | |
| Car04g01075 | Car-Chr4:6193419 | Car04g02832 | Car-Chr4:21551383 | 3.88E-66 | wgd | |
| Car04g00182 | Car-Chr4:1007855 | Car04g02832 | Car-Chr4:21551383 | 3.42E-64 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car04g02832 | - | - | cmos:111457545 | 426.787 |