Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02848 ATGGAGGAAAATTCAAGCTTTGTTTCAGAATCGACGCTCACAACCGCCATGGAAGCAGAGCCTCAAGAAGAAGACAGAGACCCAGAAAGCAATCCATTAAACCAACCCCTTCTCAAGAGAAGCAGAACTCTCTCTTCCAGTCCTCTCGCCATTGTTGGAACCAAAGTTTCTCTGATCGAGAGCTTGGATTACGAGATCAATGAGAACGATCTGTTTAAACATGATTGGAGAAGCAGATCCAGAGTTCAAGTGTTGCAGTACATATTCTCGAAATGGACATTGGCTTGTCTTGTTGGACTCCTTACCGGAATCATTGCTACTCTCATCAATCTCGCCATTGAAAACATTGCTGGATACAAGCTTTTGAAAGTGGTTGAATACATAAAAGAAGAAAGATACTTGATGGGGTTCGCCTACTTTACCACTGCCAATTTCCTTCTCACTTTGGTTGCTGCTGTTCTCTGTGTATGGTTTGCTCCCACTGCAGCTGGGCCTGGCATACCGGAAATCAAAGCCTATCTCAATGGCATAGATACTCCTAATATGTTTGGCGCCACAACGCTGATCGTTAAGATAATTGGGAGCATTGGGGCAGTGGCAGCAGGGCTAGATCTTGGGAAAGAAGGGCCTCTAGTACACATTGGCAGCTGCATTGCCTCCTTACTTGGGCAAGGCGGGACCGATAATTATCGAGTGAAATGGACATGGCTACGCTATTTCAACAACGATCGGGATCGTCGAGATCTCATCACTTGCGGGGCGTCGTCGGGGGTTTGTGCAGCGTTCCGAGCTCCAGTTGGCGGTGTTCTATTTGCTCTAGAAGAGGTGGCTACTTGGTGGAGGAGTGCCTTGCTGTGGAGGACATTTTTTAGCACAGCCATTGTTGTGGTGGTGCTAAGAACATTCATTGAAGTATGCAAGGCTGGTGACTGTGGGCTGTTTGGTGAAGGAGGGCTTATAATGTTTGATGTCAGTGGCGTTTCTGTGAGTTACCGTATTATGGACATCATACCAGTTGCTATCATTGGCCTTCTTGGTGGGTTCCTTGGGAGTCTTTACAACCATCTTTTGCACAAAGTTCTGAGAGTTTACAACCTCATAAACCAGTAA 1110 46.4 MEENSSFVSESTLTTAMEAEPQEEDRDPESNPLNQPLLKRSRTLSSSPLAIVGTKVSLIESLDYEINENDLFKHDWRSRSRVQVLQYIFSKWTLACLVGLLTGIIATLINLAIENIAGYKLLKVVEYIKEERYLMGFAYFTTANFLLTLVAAVLCVWFAPTAAGPGIPEIKAYLNGIDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGTDNYRVKWTWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAIVVVVLRTFIEVCKAGDCGLFGEGGLIMFDVSGVSVSYRIMDIIPVAIIGLLGGFLGSLYNHLLHKVLRVYNLINQ 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21611107 21612596 + Carg06033-RA Car04g02848 148273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02848 369 MobiDBLite consensus disorder prediction 1 35 - -
Car04g02848 369 MobiDBLite consensus disorder prediction 1 18 - -
Car04g02848 369 Pfam Voltage gated chloride channel 148 365 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02848 Car-Chr4:21611107 Car15g00084 Car-Chr15:497110 0 dispersed
Car04g02848 Car-Chr4:21611107 Car16g00792 Car-Chr16:5197673 3.12E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02848 K05016 - csv:101210008 703.36