Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02849 ATGGATCTCATTGAAATCAAATGGTATTTGCAGGAAGGGAAAAATGCAGAAGCTTACAGTCTCCCTTACCTTGTCCAATGCACTCCCTGCAACCCTTCTCTTCCAGATTCCGTTTGCCCCACCAATGGCCGCTCCGGCAACTTCAAGCAATTCAACTGTCCAAAAGGCCAATACAACGACCTCGCTACCCTTCTCCTTACCACCAACGACGACGCCGTTCGAAACATATTCTCCATCAACACTCCGGCCGAGTTCCAGCCCCTTTCCCTTGTAATCTTCTTCCTTCTCTACTGCGTTTTAGGGTTAATCACCTTCGGCATTGCCGTCCCCTCCGGTCTCTTCCTTCCGATCATCTTGATGGGCTCTGGCTATGGCCGACTCATCGGCCTTCTCATGAAACCCTACACGAATCTCGATCAAGGACTCTTGGCTGTTCTCGGAGCTGCCTCGTTAATGTCCGGCTCGATGAGGATGACGGTTTCGCTCTGTGTTATATTCCTCGAGCTCACGAATAATCTCCTCCTGCTTCCGATTACGATGATTGTCCTTCTGATATCGAAAACCGTCGGGGACAGTTTTAACCCTAGTATTTATGAGATTATTCTGCACTTGAAGGGGCTTCCGTTCCTGGACGCAAATCCGGAGACGTGGATGAGGAACATCACGGTCGGCGATCTCGCCGACGCAAAACCGGCGGTGGTAACGCTGCGGGGATTGGAGAAGGTGTCTCGGATTGTGGAGGTTCTTAAGAACACGACGCACAATGGATTCCCCGTAGTGGACGCGGAAGCGGTGGTGCCGCCAGTGGGGATGGCGGTGGGCGCGACGGAGCTGCACGGAGTGGTATTGAGAAAGCATTTGCTGCAGTTGCTGAAGAAGAAATGGTTCTTGAGAGAGAGGAGGAGGACGGAGGAATGGGAAGTGAGGGAGAAATTTACATGGGTTGAATTAGCGGAGAGGGAAGGGAAGATCGAGGAACTTGCAGTGACGAAGGAGGAGATGGAAATGTACGTTGATCTTCATCCTCTGACGAACACAACGCCGTATACAGTGATTGAAAGCATGTCGGTGGCCAAAGCTCTGGTTCTGTTCCGGCAAGTGGGGCTTCGGCATTTGCTGATTGTGCCCAAATATGAAGCAGCTGGGGTTCCTCCAGTAATTGGGATATTGACGAGGCAGGATTTAAGGCCATATAACATCCTGACTGCATTTCCTCATCTGACCAGAATCAAAAGCAACCACAAAGGGAACTAA 1254 50.96 MDLIEIKWYLQEGKNAEAYSLPYLVQCTPCNPSLPDSVCPTNGRSGNFKQFNCPKGQYNDLATLLLTTNDDAVRNIFSINTPAEFQPLSLVIFFLLYCVLGLITFGIAVPSGLFLPIILMGSGYGRLIGLLMKPYTNLDQGLLAVLGAASLMSGSMRMTVSLCVIFLELTNNLLLLPITMIVLLISKTVGDSFNPSIYEIILHLKGLPFLDANPETWMRNITVGDLADAKPAVVTLRGLEKVSRIVEVLKNTTHNGFPVVDAEAVVPPVGMAVGATELHGVVLRKHLLQLLKKKWFLRERRRTEEWEVREKFTWVELAEREGKIEELAVTKEEMEMYVDLHPLTNTTPYTVIESMSVAKALVLFRQVGLRHLLIVPKYEAAGVPPVIGILTRQDLRPYNILTAFPHLTRIKSNHKGN 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21612634 21614274 + Carg06034-RA Car04g02849 148274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02849 417 Pfam Voltage gated chloride channel 65 190 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car04g02849 417 ProSiteProfiles CBS domain profile. 344 408 IPR000644 -
Car04g02849 417 Pfam CBS domain 346 396 IPR000644 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02849 Car-Chr4:21612634 Car15g00084 Car-Chr15:497110 0 dispersed
Car04g02849 Car-Chr4:21612634 Car04g00826 Car-Chr4:4828587 1.08E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02849 K05016 - csv:101210008 695.656