Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02933 ATGGAAGATTCCTCCAACTCAGGTGATGATCGGAAGAATACCCGTTTCTACCACCCTTACCAAGACCTACACGTTCCGATCACAAAGCTCTACGAGCTCCCCACCGCTCCCGAGCATCTTTTCTTCGAAGAGGCCGCCAGGCCCCACCGTTCTTGGGGGGAAAATCTCCAGTACTATACTGGAATTGGCTACCTCTCTGGCGCCCTTCTCGGCGGCGCCAGAGGCTCTATTCAGGGTCTCAGAGCGGCAGAGCCTGGCGACTCTGTCAAGCTCCGTCTCAATCGAGTTCTCAATTCTGGGGGCCAGCTCGGTCGGAGGGCTGGGAACTCTCTTGGGATTCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTACTGATGATGTTTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTACAAGGCGGCTTCCGGGCCAAGGTCAGCCGCTATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGAAAGCAGGCAGTTAAGAGATATGTGCCGATATAG 555 54.77 MEDSSNSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22026741 22027295 - Carg06121-RA Car04g02933 148358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02933 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Car04g02933 184 PANTHER TIM23 6 184 IPR045238 GO:0022857
Car04g02933 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 6 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02933 Car-Chr4:22026741 Car17g00669 Car-Chr17:6201454 4.73E-70 dispersed
Car12g00815 Car-Chr12:7823689 Car04g02933 Car-Chr4:22026741 3.50E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02933 K17794 - csv:101211511 303.908