Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00002 ATGGATCTGGAAACTGGGGTTTATCCCAAGTATGCTAAGAAGGATTCATGGAAGACAGTTCTGACTCTAGCTTTTCAGAGTCTTGGGGTCGTCTATGGTGATTTAAGCACCTCACCTCTATACGTGTATAGGAACACTTTTGCTGAAGAAGACATTGAACACTCGAAGACCAACGAAGAGATTTACGGCGTTTTGTCATTCATTTTCTGGACCCTTACCATTGTCCCTTTGCTCAAATATGTATTTATTGTGCTCAAAGCAGACGATAATGGCGAGGGAGGGACTTTTGCTCTCTACTCATTGTTGTGTCGACACGCCCGAGTCGGCTGGTTGCCCAATGTTCAAGCGGCAGACGAGGAGCTGGCTGAGTACAAGAAAGAAACCATAATTTTGCCACCCAAAAAAAGCTTTGCATCTAAGCTGAAATCCACGTTAGAATCGCATAAGGTATTGCAGACACTTCTGCTCATTCTGGCTTTGATCGGGACGTGTATGGTAATTGGCGACGGCATCTTAACGCCTGCTATTTCTGGTATTTATGGCATTCCCTTTCTTGGCTTTTTTTCTGCTGTCTCTGGACTGGAGTTCACGATGTCAAAACAGCATCATAAATGCAAGAGTTCCTTTTCAAACGTTGATATTATCGCAGATGTGGAAGTTCCAGCTGCGTGCATCATACTCATAGGCTTGTTCGCCCTTCAACATTATGGAACGCACAGGGTTGGGTTCTTGTTTGCTCCTATAGTTACAACATGGCTTCTGTGCATTAGCGCAATTGGTTTATACAACATCATTCACTGGAATCCTCATGTTTATCAAGCACTTTCTCCTTATCATATGTTCCTATTCTTGAAGAAAACAAGGAGAGGAGGTTGGATGTCACTAGGAGGGATTCTACTTTGTATAACTGGTTCAGAAGCCATGTTTGCTGATCTTGGACACTTTTCACAATCATCCATCCAGATTGCATTTAGCTTTATGGTGTATCCATCTTTGGTTTTAGCTTATATGGGGCAGGCTGCGTATCTATCTCAACATCATTCGATACCAAATGATTATCGAATTGGATTCTATATATCTGTTCCAGAGAAGTTACGTTGGCCTGTTCTAGTAATTGCCATCCTTGCTGCTGTAGTAGGAAGCCAGGCCATCATCACTGGAACTTTCTCGATTATTAAGCAATGCTCTGCTTTGAATTGCTTCCCCAGAGTCAAAATAGTTCATACATCATCTAAAATTCATGGTCAAATTTATATCCCTGAGATTAATTGGATCCTGATGCTTTTATGCTTAGCCGTTACAATTGGTTTCAGAGATACAAAACGTTTGGGTAATGCATCAGGCTTGGCAGTAATCACGGTGATGTTGGTGACGACCTGTTTAATGTCGTTGGTCATTGTGATTTGCTGGCACCAGAGTGTTGTCCTAGCAATTTGCTTTGTGGTCTTCTTTGGGTCAATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTAGAAGGAGCATGGGTTCCCATTGCGCTTGCCGTGGTCTTCATGATTATTATGTATGTGTGGCACTATGGAACGCTGAAGAAGTATGAATTTGATTTTCAAAATAAGGTCTCAATGAATTGGTTGCTTAGTGTGGGATCCAGTCTAGGTATTGTCCGAGTCCGCGGGATTGGGATTGTGCACACTGAACTTGTCTCAGGGCTTCCAGCAATGTTTTCACACTTCGTGACCAACCTTCCTGCGTTCCACCAGGTGGTGGTTTTTCTTTGCATCAAGTCTGTTCCAGTCCCACATGTTAAACCTGAAGAGCGGTTCCTAGTTGGTCGAATTGGAGCTCGTGAGTACAGGTTGTACAGGTGCGTTGTGCGATATGGATACAGAGATGTGCACAAGGATGACACCGAGTTTGAAAAAGATCTTGTATGTAGTATAGCTGAGTTTATAAGATCACAGAAGGTGGAATCCAGTGGTTGCAATGCTAATGCAGAGGATGATATTTGGAAGGAAAATGAGAGAATGACAGTAGTTGGAATGTGCTGTACGCATAGAGACGGAATTCAAATGCAAGAGGATGATGATGAAGAGTTGGGGGAGACGTCTGAGCATAGGGAAATAATGTCACCACGACGTCGGAATCGTATCGTCCGGGCACCCAAGAAAAGGGTGAGGTTTATTGTGCCGGAGAGTCCAAAAGTTGAGGCAACAGCAATGGAGGAACTGCAGGAGTTGATGGAAGCAAGGGAAGCAGGAGTTGCTTACATATTGGGTCAGGCGCATACTAAAGCAAAGCAGGGATCCAGCATGCTACGAAAGCTTATAATTAATTATGGGTATGAATTGTTAAGGAGGAATAGCAGGGGACCCAGTTACCCCCTCAATTTACCTCATGCGTCTACTCTTGAGGTAGGAATGTTGTACCATCTCTGA 2424 43.36 MDLETGVYPKYAKKDSWKTVLTLAFQSLGVVYGDLSTSPLYVYRNTFAEEDIEHSKTNEEIYGVLSFIFWTLTIVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARVGWLPNVQAADEELAEYKKETIILPPKKSFASKLKSTLESHKVLQTLLLILALIGTCMVIGDGILTPAISGIYGIPFLGFFSAVSGLEFTMSKQHHKCKSSFSNVDIIADVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTTWLLCISAIGLYNIIHWNPHVYQALSPYHMFLFLKKTRRGGWMSLGGILLCITGSEAMFADLGHFSQSSIQIAFSFMVYPSLVLAYMGQAAYLSQHHSIPNDYRIGFYISVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSSKIHGQIYIPEINWILMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVICWHQSVVLAICFVVFFGSIEAMYFSASLIKFLEGAWVPIALAVVFMIIMYVWHYGTLKKYEFDFQNKVSMNWLLSVGSSLGIVRVRGIGIVHTELVSGLPAMFSHFVTNLPAFHQVVVFLCIKSVPVPHVKPEERFLVGRIGAREYRLYRCVVRYGYRDVHKDDTEFEKDLVCSIAEFIRSQKVESSGCNANAEDDIWKENERMTVVGMCCTHRDGIQMQEDDDEELGETSEHREIMSPRRRNRIVRAPKKRVRFIVPESPKVEATAMEELQELMEAREAGVAYILGQAHTKAKQGSSMLRKLIINYGYELLRRNSRGPSYPLNLPHASTLEVGMLYHL 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9120 13528 - Carg21802-RA Car05g00002 148388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00002 807 Pfam K+ potassium transporter 24 627 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01748 Car05g00002 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00269 Car-Chr4:1504596 Car05g00002 Car-Chr5:9120 7.37E-159 dispersed
Car04g00999 Car-Chr4:5743448 Car05g00002 Car-Chr5:9120 0 dispersed
Car05g00002 Car-Chr5:9120 Car16g00593 Car-Chr16:3760284 0 dispersed
Car14g00708 Car-Chr14:3944010 Car05g00002 Car-Chr5:9120 0 dispersed
Car04g01748 Car-Chr4:10032393 Car05g00002 Car-Chr5:9120 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00002 K03549 - cit:102630777 1230.7