Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00019 ATGTCGTCCACACTGGAACACCTCCTGCCCGACCCCTCCGAACAGATTCGCTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAATGTGCCATACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGCGGCAACTGCACTGGCCTCCTCTCCGTCAACATGGCCAAGCCCTCTTTTATCCCTTTTGATCTTCTCACTTCCCTCTCTCACAACTTGCCAAAGGAGCCTTTCCAAGACTTGAACGTCCAGAAACACTTGTGCTTGGACAACCTCAACAACACATCCGACCTCCTAACCTCGTACCACAACATTATCCAAAATCACGAAGACGATGAAGATGATGGCATCATCATTCCACCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAGCAGCGAGCCCCGTCAGCTTATAACCAATTCATCAAGGAGGAGATTCGGAGGCTGAAGGCGGAGAACCCGGGAATGGCGCATAAGGAGGCATTCAAGACAGCGGCAAAGAATTGGGCTCATCTCCCTCCAGTCAATGGCGAAGAAGGAGATCACGTGGGGAGCGGGCGGAAGGGAAAGAGCTTAATCAGCTTTCAATATATGAACCCAAGCTTGGAGATTACATCCGCCTTCTCCGAGCTGCTTAAAATGTGA 651 50.38 MSSTLEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFIPFDLLTSLSHNLPKEPFQDLNVQKHLCLDNLNNTSDLLTSYHNIIQNHEDDEDDGIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGEEGDHVGSGRKGKSLISFQYMNPSLEITSAFSELLKM 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 110295 111776 - Carg21819-RA Car05g00019 148405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00019 216 Pfam YABBY protein 12 177 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g01775 Car05g00019 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00019 Car-Chr5:110295 Car15g01044 Car-Chr15:8220769 1.41E-39 dispersed
Car04g01775 Car-Chr4:10145112 Car05g00019 Car-Chr5:110295 1.29E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3501 PF04690 YABBY 1.70E-54 CL0114 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00019 K25796 - csv:101211011 313.923