Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00036 ATGTCAAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCTGATGCCGAGCGTGCTGAGGATGAGGAGCGAGAGGCGCAAGCTGCTGCGGCCGCTTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCCGTCAGCACTAAGCCCAAGAAAAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCATGGCGCCGGCGGTAGGCTAACGGACAGCCAGGGCTTGACCCCGGAGGAGATGATTCGGCTTCCAACTGGTCCAAAAGACCGCTCTGGTGAGGAAGTACGTTCTGGCCGGCTCGGTGGGGGATTTCCCACTTATGATCGCCAAGGTATGTCTGCTGGTCGATATCGAGACCGTGATGATGGCGATGGGTCCTGGGGTGGTGGTCGACGATCTTATGGCGGGTTTGATGAGGAACGCAGGGGCTCATCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGTCGACAAAATAGGTATGTGTCGCTAGGCGGTGGTGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCACGTGAGAAAAAGCCTATTCCATCGAGATCCTCCACATTCGGTTCCGGTTATCGTGAGGCGAATGAGCCTGATCGATGGGGTAGAGGCCGTTCACGTGATAGTGTCACAGAACGACCCCGATTAGTGTTGGATCCACCCAAAGGTAATGTCGTAACAAATGAAGCAACAAGGACGAACAAGCCAAACCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCCGAGAAGGGATTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAAAACCAGTAGGCCAACTAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCTAAACCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGATTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAGGAGGAAATTAATGTTCTAAGAAAGGAACTTGAGGAAGGCTTACACCTGAATACCAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATGCAAAACCTGCGTGACAGAATAAATAAAAAAGAACGTGAACTGGAGACGTTGATCCTTGATTTGGATGATAAAGTTCGGTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAAGGCTGCTCCCTTTCAAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTGTGGACAGACCTCGATCACGAGGCACTACAGATGTATGGAGTAGGTCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATGGAGGATTTTTGGGTAACAGAAACATAGAGAGGTCGAGGGATAGATGGTAA 1554 51.09 MSKPWGGIGAWAADAERAEDEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGHGAGGRLTDSQGLTPEEMIRLPTGPKDRSGEEVRSGRLGGGFPTYDRQGMSAGRYRDRDDGDGSWGGGRRSYGGFDEERRGSSPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYVSLGGGVGGIASRADEVDNWAREKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSVTERPRLVLDPPKGNVVTNEATRTNKPNPFGAARPREEVLAEKGLDWKKLDTEIEAKKTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEINVLRKELEEGLHLNTNKESVQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGKAAPFQERPPSQGSFDESRSFESVDRPRSRGTTDVWSRSADDRKPIQGARDGGFLGNRNIERSRDRW 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 192126 198444 - Carg21836-RA Car05g00036 148422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00036 517 MobiDBLite consensus disorder prediction 1 344 - -
Car05g00036 517 Pfam Plant specific eukaryotic initiation factor 4B 1 503 IPR010433 GO:0003743
Car05g00036 517 Coils Coil 15 35 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 435 517 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 469 498 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 118 132 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 303 322 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 276 302 - -
Car05g00036 517 Coils Coil 403 430 - -
Car05g00036 517 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00036 Car-Chr5:192126 Car16g00611 Car-Chr16:3911868 6.59E-44 dispersed
Car12g00031 Car-Chr12:155270 Car05g00036 Car-Chr5:192126 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00036 - - csv:101206526 876.315