Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00045 ATGGCTTCCGTCTCATTTTACCGCCCAAGCTTTGTGTTCTCTTCATTTCCGAACCGTGTTCCGACCTCAAATCCTCTATTTCATGGAGTCCAATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGTGGTTCCCTTCCGGTGGCGAGATTTGGGTTTAAACCCGAGTTCTTGCCTGACCCGGATCACGCCGAGGGCTTTGTGAGAGAGTTATTCGGCAAAGCTGAGAGCGTTCTTTACACGATTGCCGACGCCGCGGTGTCTGCTTCTCCGGATAATGTTACCACCGCCAAACAGACGGAGGATTGGTTTACGGGGATCACCAATTATATGGAGAGCATCCTTAAAATTCTTAAGGATGGCCTTTCTGCTGTCCATGTTCCTTATGCCTATGGTTTTGCCATTATACTCCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTGACGAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCGCAAGTGAAGGCTGTTCAGCAACGCTATGCTGGGGATCAGGAGAGGATTCAAGTTGAGACCGCTCGACTGTACAAATTAGCTGGCATAAACCCACTGGCAGGTGCTAAAATTGTGCCTGTTTTTAGAGATATAGTTACTCTGATAAGTTTAGTAGGTCTCCTCACGGAAGGCTTTTTCTGGATACCCTCTCTGGCTGGTCCAACCACAATTGCTTCTCGACAAAATGGGAGCGGTATCTCTTGGCTCTTTCCATTTGTCGATGGCCGTCCACCACTTGGGTGGTCAGATACTTTTGCATATCTTGTCCTGCCGGTGCTGCTGGTCGTCTCACAGTACATCTCTGTTCAAATTATGCAATCGTCTCAGAATAATGATCCAAACATGAAGAGTTCTCAAGCCATATTGAAGTTCCTACCGTTAATGATCGGATATTTTGCACTTTCGGTTCCTTCGGGTCTAAGCCTTTACTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGTGCGAAAACCCCGGACAAACAATTGATTGATGAAATCATGAAACAAGAACAACCCCAAATCCAGAGGCAAGTGCCCAAGTTAGACGCAACCTCGAGTAGCACGGTAGCTCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAACCTGGTGAAAGATTCAAACAGATAAAGGAGCAAGAGGCTAGGTTGAGACGGCAAAGTGAAGAAGAAAAAAGGAACGCTGAAGAGGCAGCCGACAAGAGTGCAATTGTTGGAGTTGGTGTCAATGGCAGTCTTTCTAGAACGGATGTAAAGGAAGACCAAGGCTCCATATCTATGTCTACCATGCAACGAACAGATGTGGAAAACAAGCCAAGTGCAACTCCAGGGGAGGGAGTACACGAGACATACACTGGAGTGGCCAAGGATGCCAAACTAAAGGGAGAAGAACAAAGAGAGTAA 1464 46.93 MASVSFYRPSFVFSSFPNRVPTSNPLFHGVQFRGLSHHKPFLRGSLPVARFGFKPEFLPDPDHAEGFVRELFGKAESVLYTIADAAVSASPDNVTTAKQTEDWFTGITNYMESILKILKDGLSAVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQVETARLYKLAGINPLAGAKIVPVFRDIVTLISLVGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGRPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQAILKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQLIDEIMKQEQPQIQRQVPKLDATSSSTVARQEEKLTAEGLKPGERFKQIKEQEARLRRQSEEEKRNAEEAADKSAIVGVGVNGSLSRTDVKEDQGSISMSTMQRTDVENKPSATPGEGVHETYTGVAKDAKLKGEEQRE 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 234837 238670 - Carg21845-RA Car05g00045 148431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00045 487 MobiDBLite consensus disorder prediction 360 380 - -
Car05g00045 487 MobiDBLite consensus disorder prediction 431 487 - -
Car05g00045 487 MobiDBLite consensus disorder prediction 382 419 - -
Car05g00045 487 MobiDBLite consensus disorder prediction 435 458 - -
Car05g00045 487 MobiDBLite consensus disorder prediction 472 487 - -
Car05g00045 487 Coils Coil 394 421 - -
Car05g00045 487 MobiDBLite consensus disorder prediction 360 419 - -
Car05g00045 487 Pfam 60Kd inner membrane protein 131 338 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00538 Car-Chr1:3181000 Car05g00045 Car-Chr5:234837 5.58E-127 dispersed
Car05g00045 Car-Chr5:234837 Car16g00487 Car-Chr16:3114882 1.38E-08 dispersed
Car12g00041 Car-Chr12:189665 Car05g00045 Car-Chr5:234837 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00045 K03217 - csv:101205346 801.971