Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00070 ATGGATATTACCGAGGTTGAAGAAAATTTATTTGCTGCAAGTGATGCCAAGCTACACGGGGGAATGTGCAAGACTCTTTCTGCAATATATTGTGAAGTGTTATCAATTTTCCCTTCGTTGGAAGCTGCCCGACCTCGGAGCAAATCTGGTATCCAGGCATTATGTTCACTGCATGTAGCACTGGAAAAAGCCAAGAATACTCTCCAACATTGTACAGAGAGCAGCAAACTTTACTTGGCTATAACTGGGGACTCTGTCCTGTTAAAGTTTGAGAAGGTAAAAAGAGCTCTGCAAGATAGTCTTCAACGTGTTGAAGATATTGTTCCACAGTCAATTGGCTATCAGGTTCAGGAGATTATGAAGGAACTGGGAAGTACTCATTTTTTCCTAGATCCCTTGGAGAAGCAAGTTGGCGATGACATTATTTTATTGCTCCAACAGGGACGAACATTTAACAACACTGTTGACAACGATGAGCTTGAAGCTTTTCACCAAGCTGCTATTAGACTTGGAATAAACTCCTCAAGAGCAGCTCTTGCAGAGAGAAGGGCACTAAAGAAACTAATTGACCGGTCTCGTATTGAAGAGGACAAGAGGAAGGAATCCATTGTAGCATATCTTTTGCATCTCATGAGGAAGTACTCCAAGTTATTTAGAAGTGAGGTATCAGACGACAACGATTCACAGGGTTCTGGACCTTGTTCACCCACTGTTCAGGGCTCTCTCGAGGACAGTGGACCTGGTGGAAACGGTCAGGCCTTTGAAAGGCAGCTAACAAAGATTGGTTCTTTTATTTTGAAGCCAAAAAATCGCAGATTTGAGCCGACTCCCCTTCCACCTGACGAGTTGAGGTGCCATATTTCATTGCAGCTTATGTATGATCCGGTCATAATTGCTTCCGGGCAAACATATGAAAGGATTTGCATTGAGAAGTGGTTTAGTGATGGCCATAACACCTGCCCGAAAACTCAGCAGAAACTCTCTCATCTTACATTGACTCCCAATTACAGTGTTAAGGGCCTGATTACAAACTGGTGTGAACAGCATGGAGTTCCTATTCCTGATGGACCTCCAAATAGTCTTGACCTAAATTACTGGAGGCTCGCGTTATCTGAATCAGAGTCTCAATTGTCACATATGGAGTCTGTTGGTTCTTGTAAGTTGAAAGATGTTAAAGTTGTTCCACTAGAAGAAAATAGTATAACTGAGGAGATCAAAGGAAACGTAATGGACGACAAATCTGCTGAAGATCAAAAGTCCGACATAAATATGCATGCTAAATACGAAGAGTATTTGAAAGTCTTAAATGAAGAAGCTGACTTAAGGAAAAAGTCCGCGGTTGTGGAGCAAATGAGACAATTGCTCAAGGAGGATGAAGAGGCGAGGATATTTATGGGAGCTAATGGATTCGTCCAGGGACTTCTACGCTACTTAGAGATGGCCATGCGAGAACAAAATACTAGGGCTCAGGAAAGTGGAGCAATGGCTCTTTTCAACCTTGCTGTCAACAACGACAGGAACAAAGAAATAATGCTGGCGGCAGGGATGATTCCATTGTTGGAGGAAATGATTATGAACCCAAATTCCCACGGATATGCAACGGCCCTCTATCTCAACGTCTCCTGTCTGGAAGAAGCAAAATCTATTATCGGCTCAAGTTGTGCAGTCCCGTACTTGGTTCAGCCCCTCCACGCTCGTACCCAAACACTATGCAAGCTTGATGCACTTCACACACTTTACAATCTCTCAACTGTGCCCTCCAATATACCCAACCTGATTTCTTCTGAAATCATCGGGGGACTTCAAGCCCTTCTTGCAGCCCGTCTTGATCGAACATGGACCGAAAAGTGCATAGCCATCTTGATAAATATAGCTTCAAGTGAATTAGGTAGAGATCAAATGTCATCCACTCCAGAAATTATCAGTGGGTTGGCAGCAATATTAGACGGTGGTGAAGCCCTTGAGCAGGAACAAGCAGTGACTTGTCTCTTGATTCTGTGCAATGGGAATGAGAAGTGCAGTGAGATGGTCCTACAGGAAGGCGTAATTCCCGGGCTGGTGTCGATGTCTGTGAACGGGACAACGAGAGGTAAGGAGAAGGCTCAAAAGCTTCTGATGTTGTTTAGGGAGCAAAGACAACAGGAGCCACCACCGCCACTGCCACTGCCACTGCCACCTGTATCCATACCGAAACCACTATCAGAGAGTAGCGGGACATCCATGCCTGTGGCAGAATCAAAGCCACTGTGCAAGTCAATTTCAAGAAGAAAAACAGGAAAAGCTTTTGGCTTTTTATGGAAAAGCAAAAGCTATTCAGTGTACCAATTCTGA 2331 44.06 MDITEVEENLFAASDAKLHGGMCKTLSAIYCEVLSIFPSLEAARPRSKSGIQALCSLHVALEKAKNTLQHCTESSKLYLAITGDSVLLKFEKVKRALQDSLQRVEDIVPQSIGYQVQEIMKELGSTHFFLDPLEKQVGDDIILLLQQGRTFNNTVDNDELEAFHQAAIRLGINSSRAALAERRALKKLIDRSRIEEDKRKESIVAYLLHLMRKYSKLFRSEVSDDNDSQGSGPCSPTVQGSLEDSGPGGNGQAFERQLTKIGSFILKPKNRRFEPTPLPPDELRCHISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTQQKLSHLTLTPNYSVKGLITNWCEQHGVPIPDGPPNSLDLNYWRLALSESESQLSHMESVGSCKLKDVKVVPLEENSITEEIKGNVMDDKSAEDQKSDINMHAKYEEYLKVLNEEADLRKKSAVVEQMRQLLKEDEEARIFMGANGFVQGLLRYLEMAMREQNTRAQESGAMALFNLAVNNDRNKEIMLAAGMIPLLEEMIMNPNSHGYATALYLNVSCLEEAKSIIGSSCAVPYLVQPLHARTQTLCKLDALHTLYNLSTVPSNIPNLISSEIIGGLQALLAARLDRTWTEKCIAILINIASSELGRDQMSSTPEIISGLAAILDGGEALEQEQAVTCLLILCNGNEKCSEMVLQEGVIPGLVSMSVNGTTRGKEKAQKLLMLFREQRQQEPPPPLPLPLPPVSIPKPLSESSGTSMPVAESKPLCKSISRRKTGKAFGFLWKSKSYSVYQF 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 365427 370539 - Carg11936-RA Car05g00070 148456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00070 776 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Car05g00070 776 MobiDBLite consensus disorder prediction 713 744 - -
Car05g00070 776 MobiDBLite consensus disorder prediction 222 253 - -
Car05g00070 776 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Car05g00070 776 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 515 IPR000225 GO:0005515
Car05g00070 776 MobiDBLite consensus disorder prediction 714 730 - -
Car05g00070 776 MobiDBLite consensus disorder prediction 224 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00700 Car-Chr4:4061152 Car05g00070 Car-Chr5:365427 1.32E-86 dispersed
Car05g00070 Car-Chr5:365427 Car16g00655 Car-Chr16:4158012 7.55E-89 dispersed
Car12g00061 Car-Chr12:256711 Car05g00070 Car-Chr5:365427 0 wgd
Car18g00655 Car-Chr18:7816975 Car05g00070 Car-Chr5:365427 0 wgd
Car04g01836 Car-Chr4:10633185 Car05g00070 Car-Chr5:365427 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00070 - - csv:101220593 1296.18