Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g00080 | ATGTTCTTCCTCGAGAATTTGTGGCAGATGCTCTGTGTTCAAGGTTTCCAGGATAAAGCTCGAGTTCTCTCCGAGTCTCTTATCCGGACCGTATCCGAATCCATGGGCAATTCGGATTGTGGCGTCTCGGAGTTAGAACTCTGTAGAGACGATTCGGCTGCGTTTCATTTCAAATTAATCGCCATCGCCTCCATTCTCACATCGGGAGTCATCGGAATCGCCATTCCATTGTTTGGCAGCCAGCGCCGGTTTCTCAAAACAGACGGAAATCTGTTCGTGACGGCGAAGGCGTTTGCCGCCGGTGTAATTCTCGCCACCGCTTTTGTGCACATGCTTCCGGACGGATCGAAAGCCCTCTCCGATCCGTGCTTGCCGAAATTCCCATGGTCGAAATTCCCCTTCTCGGGATTCTTCGCGATGATGGCGTCGCTGTTGACACTCCTCGTCGATTTCGTCGGGACTCAATACTACGAGCGAAAACAGGGGGTGATTCGATCGAAAGAGGAGGAGAACCGGGTCGGGTCGGTGGAAGATTCCGGGTTGGAATCGGGCATTCTTCCGGCCGGAGATTTGAACGTGAAAGTGTTCGGGGAAGAAGACGGCGGCGCGATGCACATCATTGGAATGCATGCCCACGCCGCCCACCATCGTCACAGTCATCCGCAGGGGAAGGAGGCATGTGATGGGCACGTGAGAGTCCACGATCATGGCCATGCCCATGGAGGACATGGTCATTCTCATGGGCTTGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGGTAATTTTTTTTTTCTGTTCGAGTTTTCGCCTCCACGTGTCAATGTCGCTTGACTTACTGACCAACTTCTTTTCATCCCTCCTTTTTCCTCATGCCTTGTGA | 897 | 52.84 | MFFLENLWQMLCVQGFQDKARVLSESLIRTVSESMGNSDCGVSELELCRDDSAAFHFKLIAIASILTSGVIGIAIPLFGSQRRFLKTDGNLFVTAKAFAAGVILATAFVHMLPDGSKALSDPCLPKFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGVIRSKEEENRVGSVEDSGLESGILPAGDLNVKVFGEEDGGAMHIIGMHAHAAHHRHSHPQGKEACDGHVRVHDHGHAHGGHGHSHGLDGDDDESGVRHVVVSQVIFFFCSSFRLHVSMSLDLLTNFFSSLLFPHAL | 298 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 413327 | 414780 | + | Carg11926-RA | Car05g00080 | 148466 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g00080 | 298 | MobiDBLite | consensus disorder prediction | 234 | 255 | - | - | |
| Car05g00080 | 298 | Pfam | ZIP Zinc transporter | 56 | 267 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g00080 | Car-Chr5:413327 | Car13g00984 | Car-Chr13:9823321 | 9.31E-25 | dispersed | |
| Car12g00589 | Car-Chr12:3928794 | Car05g00080 | Car-Chr5:413327 | 3.88E-123 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g00080 | K14709 | - | csv:101218224 | 417.542 |