Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00097 ATGATTAACGAATCAATGTTTCTCAATCCCACGCCTCACATTTCATCATGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCATATTTCACCGCGGGCAACGTGTCGCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCGTCGCTCTGGGAGGATCAAGACTTGCCGGCCATGGTGGACGCCTTCACGTGCGACCATTTCCGGATGTACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTATGCCCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAATATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCGGACTCAGCCATGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCCCACTCGTCGGAGCAACTCCGGATTCCAGGGAAACAGAGCATCAGGTCTCCCCGAGGCAGGGAAATCGCCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCGGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAATCGTTCAGTAGATTAGTCGCATTGATGCACAATCTCCACTTTGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATTTGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCGGTGGAGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA 921 55.16 MINESMFLNPTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLPAMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREIAASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLILAGSRN 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 498875 499795 - Carg11908-RA Car05g00097 148483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00097 306 ProSiteProfiles Zinc finger C3H1-type profile. 110 137 IPR000571 GO:0046872
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00097 Car09g00274 CCT
Car05g00097 Car09g00274 ECH
Car01g01366 Car05g00097 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00097 Car-Chr5:498875 Car10g00622 Car-Chr10:3158837 1.28E-77 dispersed
Car01g01366 Car-Chr1:12022257 Car05g00097 Car-Chr5:498875 1.04E-79 wgd
Car12g00569 Car-Chr12:3813502 Car05g00097 Car-Chr5:498875 9.81E-147 wgd
Car05g00097 Car-Chr5:498875 Car09g00274 Car-Chr9:1495919 8.01E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00097 - - csv:101214248 516.924