Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00130 ATGAAGATTCAAACTTGCAGAGTTTCGCAATGGTTTCTTCTGTTTTTGATTTCGTCCTGTTCCTGCTCGTTTGCAGCAGCACAGAAGAGCAGTCAGCAGTTGAAGAAGAAGACTTATATAATTCATATGGACAGAACCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCAGTTTCTGATTCAGCCCAAACGCTTTATTACTACAACACAGTGGTTCATGGCTTCTCCACAAGATTGACAGTGGAGGAGGCTAAGCTGATAGAGAAGCAAGAAGGAATTCTGGCTGTCATACCGGAACTGAAATACGACCTCCATACCACACGGACGCCCGAGTTTCTTGGACTTGAGAAGAGCGTCTCTTTCTTCCCGGCGTCGGTGAAGGTCGGCGAAGTGATCGTCGGTGTTCTTGACACCGGTGTATGCCCTGAATTGGAGAGCTTCGATGATACAGGGCTAGGGCCGGTGCCTGTAAGCTGGAAAGGGGAGTGCGAAGTGGGTAAAAACTTCAGCTCTTCTAGTTGTAACAGGAAATTGATCGGAGCCAGGTACTTTTCAAAGGGCTATGAAGCGGCATTTGGTGCAATTGACGAATCCCAAGAGTCCAAATCGCCGAGGGATGACGATGGCCACGGAAGTCACACTTCAACAACCGCTGCTGGATCTGCCGTGACCGGAGCAAGCCTCTTTGGTTTCGCTGCAGGAACTGCAAAAGGTATGGCGGCTGAAGCTCGGGTTGCAACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCTCTGACATTTTGGCTGCCATGGATAAGGCCATTGAAGATGGTGTCAATGTTCTATCCTTGTCGCTTGGTGGATCTTCCCCTGATTACTACAGAGACAATGTTGCCATTGGCGCCTTCTCTGCTACGGCTCAGGGAGTTTTTGTGTCATGTTCTGCTGGAAATGGTGGGCCATCATCAGGTAGTTTGTCCAACGTTGCGCCGTGGATAACCACTGTTGGCGCTGGGACTCTGGACAGAGACTTCCCTGTATATGTTACTCTTGGAAATGGGAAGAAGTTCACAGGGCAGTCGCTCTACAATGGAAAGCCCTTGTCAGACTCTTTAATACCAATTGTATATGCAGCCCATGCGAGTAATTCAACCAGTGGCAGCCTTTGTTTGACCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTCTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAAGCCGGCGGTGCAGGGATGATTCTGGCCAACACTGAAACATACGGCGAGGAACAATTAGCCGATGCACATCTCTTGCCGGCGGCGGCCGTTGGCCAGAAAACGGGCGACGCAATAAAGAGCTACATCTCCACCAACGCTAATCCAACAGCAACAATCAGCGCCGGCACCACAAGATTGGGAGTTCAACCATCGCCGTTGGTGGCCGCATTCAGTTCTCGAGGCCCGAATCTCCTTACTCCGCAGATTCTCAAACCCGATCTAATAGCACCGGGAGTGAACATTCTGGCTGGATGGGCCGGCGGCGTCGGACCAACAGGCTTAGATAGCGATAAGCGACATGTGGCCTTCAACATCATCTCTGGCACATCAATGTCGTGCCCTCACATTAGCGGATTAGCCGCTCTTCTAAAAGCCGCTCATCCAGATTGGAGCCCAGCCGCCATTAGATCTGCTCTAATGACCACAGCTTACTCAACATACAAAACCGGCGAAGCAATACAAGACGTATCCAGCGGATTACCATCGACGCCGTTCGATATCGGAGCCGGACATGTGAATCCAACGGCCGCCCTCGATCCCGGCCTCGTTTACGATGCCACCATTGAGGACTACTTCGCCTTCCTCTGCGCCCTAAACTACAGCTCATTTCAAATCAAAGTAATCAGCAAGAAAGACTTCACCTGCAGTGGGAACAAGAACTACAAATTGGAGGATCTCAACTACCCGTCATTTGCTGTTGCATTGGAGACCCCTTCCACCAAAGGCGGCGGCGAAGGCACCGCACCAACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCCCCATCGACGTATAAGGTCTCTGTAACGTCGAAAAGCCCGTCGGTGAAGATTATGGTTGAACCAGAATCATTGAGTTTTGCGAAGCCCAATGAGCAGAAGAGTTACACGGTAACATTCGTTGCTTCTGCAATGCCGTCGGGGTCTGAGAGCTTTGCTCGTCTGGAATGGTCGGATGGGAAACACAATGTGGGTAGCCCCATTGCCTTCACCTGGACTTGA 2322 50.39 MKIQTCRVSQWFLLFLISSCSCSFAAAQKSSQQLKKKTYIIHMDRTNMPQAFDDHFQWYDSSLKSVSDSAQTLYYYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPELKYDLHTTRTPEFLGLEKSVSFFPASVKVGEVIVGVLDTGVCPELESFDDTGLGPVPVSWKGECEVGKNFSSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTAKGMAAEARVATYKVCWLGGCFGSDILAAMDKAIEDGVNVLSLSLGGSSPDYYRDNVAIGAFSATAQGVFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPVYVTLGNGKKFTGQSLYNGKPLSDSLIPIVYAAHASNSTSGSLCLTSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGAGMILANTETYGEEQLADAHLLPAAAVGQKTGDAIKSYISTNANPTATISAGTTRLGVQPSPLVAAFSSRGPNLLTPQILKPDLIAPGVNILAGWAGGVGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKTGEAIQDVSSGLPSTPFDIGAGHVNPTAALDPGLVYDATIEDYFAFLCALNYSSFQIKVISKKDFTCSGNKNYKLEDLNYPSFAVALETPSTKGGGEGTAPTTVKYTRTLTNKGAPSTYKVSVTSKSPSVKIMVEPESLSFAKPNEQKSYTVTFVASAMPSGSESFARLEWSDGKHNVGSPIAFTWT 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 659431 661752 + Carg11874-RA Car05g00130 148516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00130 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Car05g00130 773 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Car05g00130 773 Pfam Fibronectin type-III domain 663 769 IPR041469 -
Car05g00130 773 ProSiteProfiles Serine proteases, subtilase domain profile. 109 616 - -
Car05g00130 773 MobiDBLite consensus disorder prediction 204 226 - -
Car05g00130 773 Pfam PA domain 387 463 IPR003137 -
Car05g00130 773 Pfam Subtilase family 139 584 IPR000209 GO:0006508|GO:0008236
Car05g00130 773 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01261 Car-Chr2:8478096 Car05g00130 Car-Chr5:659431 0 dispersed
Car05g00130 Car-Chr5:659431 Car10g00692 Car-Chr10:3589429 0 dispersed
Car07g00129 Car-Chr7:800002 Car05g00130 Car-Chr5:659431 2.37E-09 dispersed
Car07g00850 Car-Chr7:4495471 Car05g00130 Car-Chr5:659431 3.73E-153 dispersed
Car05g00122 Car-Chr5:623377 Car05g00130 Car-Chr5:659431 1.04E-168 proximal
Car20g00859 Car-Chr20:7612682 Car05g00130 Car-Chr5:659431 5.42E-33 wgd
Car03g00848 Car-Chr3:6850719 Car05g00130 Car-Chr5:659431 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00130 - - cpep:111805059 1420.22