Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00145 ATGGGATCAAGCATGAAGGTTCATCAGTTCGCACGTGGATTTTGGGACGAACCCTCCCTCTCCCTCGGCTGCAAGCGCTTACGCCCTCTTGCCCCTAAGCTTCAACAACAACAACGACATCCCTCCTCCTCCTCCTCCGATCATAACACTACCACCACCACCACGCTCACCACTTTGGACCTCAAGACCTTCATCCGACCCGATTGTGGCCCCAGAAAACTGGGTTCCTCTCATGACCACAACAAAGGCTCTTCTTCCTCTTCTTCCTCTTCTTCCCCCCAGACGGCAGTGGAGACACATCCCGGGGGGACGCGGTGGAATCCAACCCAAGAACAGATTGGGATATTGGAGATGCTGTACAGCAGAGGAATGAGGACTCCCAATGCCCAACAGATTGAGCACATCACTGCCCAGCTCGGCAACTACGGCAAAATCGAAGGCAAGAACGTGTTCTATTGGTTTCAAAACCACAAAGCCCGTGAGCGACAGAAACAGAAGCGCAACAGCCTGGGTCTTCCCCACTCCCCCAGAACCCCCCCTCCTCCCATCCTCCCCACCTTCCACCCTTCCTTCCCGGGAGAGGAAGACAGTCCGTACAAGAAGAAGTGCTTGTACTGGGGGTTTGAGTGTTTGGTAGAACATAACGGTATATTGTGTAAAAAGGAGGACGGTGATAGGACTCTGGAGTTATTCCCGTTGCACCCAGAAGGCAGATGA 717 53.7 MGSSMKVHQFARGFWDEPSLSLGCKRLRPLAPKLQQQQRHPSSSSSDHNTTTTTTLTTLDLKTFIRPDCGPRKLGSSHDHNKGSSSSSSSSSPQTAVETHPGGTRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPILPTFHPSFPGEEDSPYKKKCLYWGFECLVEHNGILCKKEDGDRTLELFPLHPEGR 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 726798 727798 + Carg11859-RA Car05g00145 148531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00145 238 MobiDBLite consensus disorder prediction 35 61 - -
Car05g00145 238 MobiDBLite consensus disorder prediction 80 109 - -
Car05g00145 238 MobiDBLite consensus disorder prediction 32 109 - -
Car05g00145 238 MobiDBLite consensus disorder prediction 162 183 - -
Car05g00145 238 Pfam Homeodomain 104 163 IPR001356 GO:0003677
Car05g00145 238 ProSiteProfiles 'Homeobox' domain profile. 99 164 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00145 Car12g00518 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00145 Car-Chr5:726798 Car12g00523 Car-Chr12:3454498 2.36E-82 dispersed
Car12g00518 Car-Chr12:3424539 Car05g00145 Car-Chr5:726798 4.71E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3519 PF00046 Homeodomain 1.00E-18 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00145 - - cpep:111805075 407.527