Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00151 ATGGATGTTCTGACTCAGATGGAAAATTTTTCTGAGTTCTTTGAATTTACCGAACTGCCATCTTCGCCTTTTTCTTTTGGGAGTTCCAATATTGGTGCCACTTCACATCGCTTTCAAAACCCAACTCCCCCCATTCTCCCTTCTTATGCTCTCTCATCCACCGCTTCAATGAATAACGCCACTCACCCTCTTGCACCACCCTGTCCTCCACCCCATTCCCCTGCTGCCACCCCAAACTCCCACACGAAGCAGCAGCAAGATTCAATGGGCGCGATGAGGGAGATGATATATAGGATAGCGGCGATGCAGCCGATCCAGATTGACCCAGAAGCGGTTAAGCCACCAAAGCGGCGGAATGTGAAGATATCAAAAGATCCACAGAGCGTAGCGGCGCGGCATAGAAGAGAGAGAATAAGCGAGAGAATTAGAATACTTCAGAGAATAGTCCCCGGCGGCACCAAAATGGACACCGCTTCCATGTTAGACGAGGCCATTCATTACGTTAAGTTCTTGAAAAGCCAAGTCCAATCCCTCCAAATAGCCGCCAACAACCGCCCCTCCTCTGCCTTTCGCTTTCCGGCAGCGATGTCCGCCGGTGGAAGCAACTACAAGCAATTCCAGTTTGCTCAAAGTGGACATGAGCACGTGGAGGATGCTTGA 660 50.3 MDVLTQMENFSEFFEFTELPSSPFSFGSSNIGATSHRFQNPTPPILPSYALSSTASMNNATHPLAPPCPPPHSPAATPNSHTKQQQDSMGAMREMIYRIAAMQPIQIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKSQVQSLQIAANNRPSSAFRFPAAMSAGGSNYKQFQFAQSGHEHVEDA 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 762656 763425 + Carg11853-RA Car05g00151 148537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00151 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Car05g00151 219 Pfam Helix-loop-helix DNA-binding domain 132 171 IPR011598 GO:0046983
Car05g00151 219 MobiDBLite consensus disorder prediction 57 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00980 Car-Chr3:7568044 Car05g00151 Car-Chr5:762656 4.58E-37 dispersed
Car05g00151 Car-Chr5:762656 Car09g01018 Car-Chr9:6823919 1.02E-51 dispersed
Car05g00151 Car-Chr5:762656 Car02g00402 Car-Chr2:3100912 8.15E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3522 PF00010 HLH 1.60E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00151 - - cmos:111462825 365.925