Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00153 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGTGGAGATGGAAGACCTCCGGCCAACTATCCGTTAGCACGACAATCATCGATCTACTCCCTCACCTTCGATGAGTTTCAGAGCATGGGGAGCATAGGCAAGGATTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACTATGACATCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGTAAAGAAGGGGCTGGTACTGTTGGCGGTAGTAGTGGGTATTTGCAGAGACAGGGATCTTTGACGCTGCCAAGGACACTCAGCCAGAGGAAGGTGGATGAAGTTTGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGAATACTGTTGCTTCTAATTTGGAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAAGATACTCAAGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAACAACACTGGTTTTGGAATTGCTTTTCAGCGGCAAGCTAAAGTTCCTGAGAGTAACAATCAGATTCCGGTTCAACCGTCAAACTTATCGTTAAATGTCAATGGAGTTCGAGCACATCCGCCGCAGCCAATATTTCCAAAGCAGCCTACTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGTGGAATTATGGGGATTGCAGATCAAGGGTTGAGCACAAATTTGATGCACGGGTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATTTAACAGCTGGTCCGTTACCTATTGCAACAGAATCTCCAGTGAACCAACTATCATCAGATGGGATTGGAAAGAGCAATGGCGATACCTCGTCCGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGAGGGAGGAGAAGTAATGGGACTGTCGAAAAAGTTGTCGAGAGGAGACAACGGAGAATGATAAAAAACAGAGAGTCTGCTGCGAGATCACGGGCTCGAAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGATAACCAAGAACTCCGGAGAAAACAGGCAGAAATCATGGAAATGCAGAAAACCCGGGCGTTGGAAGTAATGGACAATCAACAAGGAATCAAGAAGCAATGCTTGAGACGAACGCAGACTGGCCCATGGTGA 1251 47.08 MNFKDFGNDPSAGNGGGDGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMTSSAAAAAAAAVGKEGAGTVGGSSGYLQRQGSLTLPRTLSQRKVDEVWKDIINEHASAKDGNTVASNLEQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIAFQRQAKVPESNNQIPVQPSNLSLNVNGVRAHPPQPIFPKQPTVTYGSQLALPSDGQLASPGIRGGIMGIADQGLSTNLMHGSALQGGRMGVVNLTAGPLPIATESPVNQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGTVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNQELRRKQAEIMEMQKTRALEVMDNQQGIKKQCLRRTQTGPW 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 769103 772895 - Carg11851-RA Car05g00153 148539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00153 416 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 209 416 - -
Car05g00153 416 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 180 - -
Car05g00153 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 180 IPR043452 GO:0003700|GO:0045893
Car05g00153 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 209 416 IPR043452 GO:0003700|GO:0045893
Car05g00153 416 MobiDBLite consensus disorder prediction 1 26 - -
Car05g00153 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 341 356 IPR004827 GO:0003700|GO:0006355
Car05g00153 416 Coils Coil 361 391 - -
Car05g00153 416 MobiDBLite consensus disorder prediction 304 326 - -
Car05g00153 416 SMART brlzneu 334 398 IPR004827 GO:0003700|GO:0006355
Car05g00153 416 CDD bZIP_plant_BZIP46 338 391 - -
Car05g00153 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 387 IPR004827 GO:0003700|GO:0006355
Car05g00153 416 Pfam bZIP transcription factor 338 390 IPR004827 GO:0003700|GO:0006355
Car05g00153 416 Gene3D - 336 392 - -
Car05g00153 416 SUPERFAMILY Leucine zipper domain 338 387 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00153 Car12g00510 CCT
Car05g00153 Car12g00510 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00153 Car-Chr5:769103 Car15g00504 Car-Chr15:2749471 2.78E-41 dispersed
Car16g01181 Car-Chr16:10020970 Car05g00153 Car-Chr5:769103 3.19E-18 dispersed
Car11g01097 Car-Chr11:8627343 Car05g00153 Car-Chr5:769103 1.00E-118 wgd
Car12g00510 Car-Chr12:3385224 Car05g00153 Car-Chr5:769103 0 wgd
Car19g00453 Car-Chr19:6249930 Car05g00153 Car-Chr5:769103 8.68E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3523 PF00170 bZIP_1 1.60E-12 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00153 K14432 - csv:101223043 716.842