Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00172 ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGCGGCCGATTCTAATTTTTCCGTTGTTCAAACCGAATCGCTCGTTCAGCGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATCGAGAAATTGGCGTTGAACTCCCCCGATCATTTCCCGATTCCCCTGATTTATCTGCAAAGTCTAGATCGCCTCTTGGGGGTTCCGAACGTTGGTCCTCGCCGGCTTTGCCCCAGCCTTTGCCTCTGCCGGAGTTATTCCCGGTTCGGAATCCAGAGTCCGATTCTTGGTTTTCTGGCCAAGGCCGTGTGGTCTCGCCTATTGAAACTCCTGTCCGTAATTCTGCTATTAAAACTGTTAGGAAGAGCTCTGATCGTGCAACAACGAATGTAAATGGAGGTCTGGGCAACAATCAAAGGCGAGTTGCTACAGATTGTAAGTTGGAAGTTGTTAATGGCAATACAGGAGGAACTGGGGCTACCACATTTACAAGCCCTCATAGTCCCTCTGTGAACTCAGGTAAATCCCTTTCGATTAAGGAGTTTGTTTTTGGTTGTTTGGATCAGCCTCCAAACAGCAAAGTCAGGGGATCCCCAACTCATCCCAGTATTCGAAGAGGTAACTACAGTTTGACACCTAAGACTTCGTCGTCAAAGAGTGCCCCAACAAGCATTTTACCGAGTCCGACCGCTAGCCCACGAAGATCATATACTGGAGATCTTTTCGTTTCTGGTTTGCCTCGCCTTGAATATCAGGAATCTCCTTTCAATAATTCTCCCAAATTTCCACCCCTTAAGACTCCACACACTTCTCAACCTTCTCCTCTCCATAGCCCGTCGGCTCGAAGTTTCGTAAGCAATCCCAAATCTCCTAACGATGTGAAATTTCCGACGCATTCTAAGTTACAAAAAGATAGTAGTAGTACAGATCGGTCTGAAAACCTCGGTCATGTCAATGCTCATCCATTGCCACTTCCTCCTCCATTCGCACACTCTTCACAATCATCTCCACTGTCGCTTTCGTCCAGCGTTCATCATGTTAATGAGAAGCCATACATTTCATCTACGAAAAGTCGGTGGCAAAAAGGAAAGCTCATTGGACGTGGTACTTTTGGAAGTGTTTATCTTGCAACCAACAGTGAAACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATGTGCTGAAAGTATAAAGCAACTAGAGCAGGAGATTAAAGTTCTCAGTCAACTTAAGCATCCAAATATTGTGCAGTATTATGGAAGCGAAATAATCGATGATCATTTCTATATATATTTGGAGTATGTTTATCCCGGGTCGATAAATAAATACGTTCGTGAACGTTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATCCACAGGGATATCAAAGGTGCAAACTTGCTAGTTGACTCGTCAGGCGTCGTCAAACTTGCAGATTTCGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGTACTGGATGGCTCCGGAGGTCATGAAGGCTGCTATGTTGAAAGATGCCAACCCTAATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGGATGGAAAACCTCCATGGAGTGAGTTTGAAGGGCATCAAGCCATGTTCAAGGTGTTGAATAAGACCCCACCGATCCCCGAAAAGCTATCTCCAGAAGGGAAAGACTTCCTCCAGTGCTGCTTTCAAAGGAATCCAGCTGACAGACCAACAGCCATGGCGCTCCTTGACCATCCATTCTTAAGATCCTCAAATGACTCGAATGTTTCAACCCCCACGTCTGCATTTTCGACAATGAACCGCATGGAAAAACTCTTCAGTCCGAAGGACCACCGTAGTCCCAAAGGAGATCAGGCGCAAAACTCTTCTGGAACTTTGGCTGAAAATGGTTATCTGTCGTGCCGTAGGTAG 2043 45.86 MPFFHKSASNSRLQQKAADSNFSVVQTESLVQRRLTRQRKLRHLTDREIGVELPRSFPDSPDLSAKSRSPLGGSERWSSPALPQPLPLPELFPVRNPESDSWFSGQGRVVSPIETPVRNSAIKTVRKSSDRATTNVNGGLGNNQRRVATDCKLEVVNGNTGGTGATTFTSPHSPSVNSGKSLSIKEFVFGCLDQPPNSKVRGSPTHPSIRRGNYSLTPKTSSSKSAPTSILPSPTASPRRSYTGDLFVSGLPRLEYQESPFNNSPKFPPLKTPHTSQPSPLHSPSARSFVSNPKSPNDVKFPTHSKLQKDSSSTDRSENLGHVNAHPLPLPPPFAHSSQSSPLSLSSSVHHVNEKPYISSTKSRWQKGKLIGRGTFGSVYLATNSETGALCAMKEVDLIPDDPKCAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIDDHFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVMKAAMLKDANPNLALAVDIWSLGCTIIEMLDGKPPWSEFEGHQAMFKVLNKTPPIPEKLSPEGKDFLQCCFQRNPADRPTAMALLDHPFLRSSNDSNVSTPTSAFSTMNRMEKLFSPKDHRSPKGDQAQNSSGTLAENGYLSCRR 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 890545 894482 - Carg11832-RA Car05g00172 148558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00172 680 MobiDBLite consensus disorder prediction 257 346 - -
Car05g00172 680 MobiDBLite consensus disorder prediction 1 20 - -
Car05g00172 680 Pfam Protein kinase domain 366 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00172 680 MobiDBLite consensus disorder prediction 52 84 - -
Car05g00172 680 MobiDBLite consensus disorder prediction 257 302 - -
Car05g00172 680 ProSiteProfiles Protein kinase domain profile. 365 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00172 680 MobiDBLite consensus disorder prediction 650 680 - -
Car05g00172 680 MobiDBLite consensus disorder prediction 195 244 - -
Car05g00172 680 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Car05g00172 680 MobiDBLite consensus disorder prediction 198 242 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00172 Car12g00485 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00172 Car-Chr5:890545 Car16g00103 Car-Chr16:632279 8.13E-110 dispersed
Car12g00485 Car-Chr12:3045166 Car05g00172 Car-Chr5:890545 0 wgd
Car03g00893 Car-Chr3:7090550 Car05g00172 Car-Chr5:890545 5.82E-167 wgd
Car05g00172 Car-Chr5:890545 Car07g00707 Car-Chr7:3640237 1.56E-173 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88871 PF00069 Pkinase 2.30E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00172 - - cmo:103487921 1043.11