Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00230 ATGATTTTCCACCAATTCTACATTAGTTTCCTTTGCCTCGCTTTGGCAGTTGTTGAGAGAGTTTCTAGCAGGAATCTGATTGCATACTTTATTTTTAGGAAAGCGAAGGAATTATATAAGAATTGGAATGGTAGGAACGTACAAGATCGTGAGCACATCTGTCTGTATATAAGTTTTGACTTTTGGGTACCCAGTGAAGTGCAAGGGACAAAGTTTAATCGTTGCCTATACTGTGCCTATGGAAAAAGTTCCACTAATTCAAAGTGGGGTGATTTGATATCGGTGATGCCGAAGGCAAATAGTGAATTGCAGGGTAGAGTCTACTCTATTGTCACTTTCCCTTTCCTATTTGCTGTAGTGTTTAGTGATTTCCATGGAATATGCTTATTGCTGGCAACATTATATCTTATAATAAGGGAGAAGAATTTTTCCAGCCAGAAACATCGAGATATCAATGAAATTACTTTTGGGACCCGTTATGTTATCAAGATGATGGCACTTTTGTCGATCTACACGACTGATTTATAA 528 37.69 MIFHQFYISFLCLALAVVERVSSRNLIAYFIFRKAKELYKNWNGRNVQDREHICLYISFDFWVPSEVQGTKFNRCLYCAYGKSSTNSKWGDLISVMPKANSELQGRVYSIVTFPFLFAVVFSDFHGICLLLATLYLIIREKNFSSQKHRDINEITFGTRYVIKMMALLSIYTTDL 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1217410 1218821 - Carg11770-RA Car05g00230 148616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00230 175 Pfam V-type ATPase 116kDa subunit family 102 172 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00230 Car12g00408 CCT
Car05g00230 Car12g00408 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00230 Car-Chr5:1217410 Car11g00918 Car-Chr11:5815382 2.36E-24 dispersed
Car05g00230 Car-Chr5:1217410 Car12g00408 Car-Chr12:2605249 7.15E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00230 K02154 - twl:120009931 103.219