Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00293 ATGGCTGGTTCTTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTACAGAGATTCTGGTCGGAGGCAAACCCAATGCCTGGAAACTCCCATCTTCCCAATCTCAGTCACTCAATCAATGGGCCGAAACCTCCCGCTTTCGCGTCGGCGACACTCTCGTGTGGAGCTACGAAGAAGGAAAAGATTCGGTACTGAAAGTGGGAAAGGAAGATTACGAAGCCTGCAACACCCAAAACCCAGAACAGAGGTTCGAGGATGGGAACACAAAGGTCGAGCTACACAAACCAGGCCCATTCTACTTCATCAGTGGCGCAAAGGGTCACTGCGAACAGGGTCAGAAGCTGGTCGTCGTCGTTGTGACTCCTCGCCGGAGATTCGTCAGCTTCTCCCCGGCGCCTTCTCCGACCGAGATTGAGGCTCCCGCGGTTGCTCCGTCGAGTGGTGCGGCGAGTTTTAATGTTGGGTTTTTAGCGGCGGCTGTCGGAATCTTGGGTCTTGGAGTTGGTTTCCTCTGA 531 53.86 MAGSSRALFLLTFLLFSFSEATEILVGGKPNAWKLPSSQSQSLNQWAETSRFRVGDTLVWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVELHKPGPFYFISGAKGHCEQGQKLVVVVVTPRRRFVSFSPAPSPTEIEAPAVAPSSGAASFNVGFLAAAVGILGLGVGFL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1619451 1620376 - Carg09366-RA Car05g00293 148679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00293 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Car05g00293 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00293 Car12g00349 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00293 Car-Chr5:1619451 Car16g00852 Car-Chr16:6228714 4.76E-35 dispersed
Car05g00293 Car-Chr5:1619451 Car12g00349 Car-Chr12:2220059 6.96E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00293 - - csv:101210664 248.825