Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00293 | ATGGCTGGTTCTTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTACAGAGATTCTGGTCGGAGGCAAACCCAATGCCTGGAAACTCCCATCTTCCCAATCTCAGTCACTCAATCAATGGGCCGAAACCTCCCGCTTTCGCGTCGGCGACACTCTCGTGTGGAGCTACGAAGAAGGAAAAGATTCGGTACTGAAAGTGGGAAAGGAAGATTACGAAGCCTGCAACACCCAAAACCCAGAACAGAGGTTCGAGGATGGGAACACAAAGGTCGAGCTACACAAACCAGGCCCATTCTACTTCATCAGTGGCGCAAAGGGTCACTGCGAACAGGGTCAGAAGCTGGTCGTCGTCGTTGTGACTCCTCGCCGGAGATTCGTCAGCTTCTCCCCGGCGCCTTCTCCGACCGAGATTGAGGCTCCCGCGGTTGCTCCGTCGAGTGGTGCGGCGAGTTTTAATGTTGGGTTTTTAGCGGCGGCTGTCGGAATCTTGGGTCTTGGAGTTGGTTTCCTCTGA | 531 | 53.86 | MAGSSRALFLLTFLLFSFSEATEILVGGKPNAWKLPSSQSQSLNQWAETSRFRVGDTLVWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVELHKPGPFYFISGAKGHCEQGQKLVVVVVTPRRRFVSFSPAPSPTEIEAPAVAPSSGAASFNVGFLAAAVGILGLGVGFL | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1619451 | 1620376 | - | Carg09366-RA | Car05g00293 | 148679 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00293 | 176 | Pfam | Plastocyanin-like domain | 33 | 118 | IPR003245 | GO:0009055 | |
Car05g00293 | 176 | ProSiteProfiles | Phytocyanin domain profile. | 22 | 126 | IPR003245 | GO:0009055 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g00293 | Car12g00349 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car05g00293 | Car-Chr5:1619451 | Car16g00852 | Car-Chr16:6228714 | 4.76E-35 | dispersed | |
Car05g00293 | Car-Chr5:1619451 | Car12g00349 | Car-Chr12:2220059 | 6.96E-70 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00293 | - | - | csv:101210664 | 248.825 |