Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00303 CACCCTGTGGGACCGATCAATATTGACCCAAATTGCTTGCCAGTGCAGTCTTTGGAAAATGCCCATCAATTTCTCTACTTAAACCCCCTCTTCCCACTTCCATTCACAACCTCTCGCTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGCGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCGAGGGCGCGCACTAACTTCCCTTACGACGCCTCTCTGTCCCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCGTCGTTGCAACTCACCAAGCAATCCTCCTCTGCCACACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAACCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGTGAGCCGTTGGATGATGATCATATTCAGCAGATGATCGATGAGCTGCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGACTGCAGGCTCAGCCCATTTGA 669 56.2 HPVGPINIDPNCLPVQSLENAHQFLYLNPLFPLPFTTSRSPLTMPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSATRRPQTDTIRTDFSVTSGIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1684311 1685193 - Carg09356-RA Car05g00303 148689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00303 222 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Car05g00303 222 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00303 Car-Chr5:1684311 Car12g00340 Car-Chr12:2145444 3.90E-61 dispersed
Car09g00404 Car-Chr9:2243837 Car05g00303 Car-Chr5:1684311 9.48E-29 dispersed
Car05g00302 Car-Chr5:1680751 Car05g00303 Car-Chr5:1684311 5.91E-61 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3541 PF00847 AP2 2.80E-11 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00303 - - cmax:111491817 327.405