Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00331 ATGCAGGAGCAAGCGACGAGTTCCGCCGCCGCTAGCTCTTTACCTTCGAGCAGTGAAAGATCGTCCAGCTCTGCTCTTCACCTCGAAGTGAAAGAAGGAATAGAGAGTGATGAAGAGATCCGGAGAGTGCCGGAGATAGGCGGCGAATCCGCCGGAACATCGGCGTCCGGCAGGGAGACCGGTTCGTTGGCCGGTCCGGACCGGGTTCAGGTTTCTCGGGAGAGTCAAAGGAAGAGAGGGAGAACTCCGGCTGACAAAGAAAGCAAGAGATTGAAGAGATTGCTGAGAAATAGAGTATCAGCACAGCAAGCGAGGGAGAGGAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAA 435 50.8 MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRETGSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQ 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1798746 1799664 - Carg09328-RA Car05g00331 148717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00331 145 MobiDBLite consensus disorder prediction 1 24 - -
Car05g00331 145 MobiDBLite consensus disorder prediction 30 45 - -
Car05g00331 145 Pfam bZIP transcription factor 86 145 IPR004827 GO:0003700|GO:0006355
Car05g00331 145 MobiDBLite consensus disorder prediction 71 107 - -
Car05g00331 145 MobiDBLite consensus disorder prediction 1 107 - -
Car05g00331 145 Coils Coil 84 145 - -
Car05g00331 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Car05g00331 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 145 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00331 Car12g00311 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00331 Car-Chr5:1798746 Car09g00014 Car-Chr9:86707 1.05E-06 dispersed
Car12g00311 Car-Chr12:2022036 Car05g00331 Car-Chr5:1798746 4.51E-75 wgd
Car04g01265 Car-Chr4:7333201 Car05g00331 Car-Chr5:1798746 1.80E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3544 PF00170 bZIP_1 1.10E-13 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00331 K16241 - csv:101218051 242.662